ECODEvolutionary Classification of Protein Domains

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PDB 5XJU

X-RAY DIFFRACTION2.58 Å7 chains6 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 2Gem-associated protein 2view chain

1 domain

e5xju21(2:42-149,2:179-280)

Chain ASmall nuclear ribonucleoprotein Sm D1view chain

1 domain

e5xjuA1(A:1-81)

Chain BSmall nuclear ribonucleoprotein Sm D2view chain

1 domain

e5xjuB1(B:13-117)

Chain ESmall nuclear ribonucleoprotein Eview chain

1 domain

e5xjuE1(E:14-90)

Chain FSmall nuclear ribonucleoprotein Fview chain

1 domain

e5xjuF1(F:3-76)

Chain GSmall nuclear ribonucleoprotein Gview chain

1 domain

e5xjuG1(G:10-72)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	2	e5xju21	2:42-149,2:179-280	SIP1	109 → 109.22 → 109.22.1
2	A	e5xjuA1	A:1-81	LSM	4 → 4.1 → 4.1.1
3	B	e5xjuB1	B:13-117	LSM	4 → 4.1 → 4.1.1
4	E	e5xjuE1	E:14-90	LSM	4 → 4.1 → 4.1.1
5	F	e5xjuF1	F:3-76	LSM	4 → 4.1 → 4.1.1
6	G	e5xjuG1	G:10-72	LSM	4 → 4.1 → 4.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors