ECODEvolutionary Classification of Protein Domains

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PDB 5XM8

X-RAY DIFFRACTION2.55 Å8 chains4 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ARepair DNA polymerase Xview chain

1 domain

e5xm8A1(A:-2-174)

Chain BRepair DNA polymerase Xview chain

1 domain

e5xm8B1(B:0-174)

Chain CRepair DNA polymerase Xview chain

1 domain

e5xm8C1(C:-2-174)

Chain DRepair DNA polymerase Xview chain

1 domain

e5xm8D1(D:0-174)

All Domains (4)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5xm8A1	A:-2-174	NTP_transf_2,DNA_pol_B_thumb	316 → 316.1 → 316.1.1
2	B	e5xm8B1	B:0-174	NTP_transf_2,DNA_pol_B_thumb	316 → 316.1 → 316.1.1
3	C	e5xm8C1	C:-2-174	NTP_transf_2,DNA_pol_B_thumb	316 → 316.1 → 316.1.1
4	D	e5xm8D1	D:0-174	NTP_transf_2,DNA_pol_B_thumb	316 → 316.1 → 316.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors