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PDB 5YDR

X-RAY DIFFRACTION1.50 Å3 chains4 ECOD domains
View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain APolyubiquitin-Bview chain
1 domain
Chain BDNA (cytosine-5)-methyltransferase 1view chain
2 domains
Chain DPolyubiquitin-Bview chain
1 domain

All Domains (4)

#ChainDomain IDRangeFamilyClassification
1Ae5ydrA1A:-1-73ubiquitin221 → 221.1 → 221.1.1
2Be5ydrB1B:350-501DNMT1-RFD3497 → 3497.1 → 3497.1.1
3Be5ydrB2B:502-599DNMT1-RFD101 → 101.33 → 101.33.1
4De5ydrD1D:0-72ubiquitin221 → 221.1 → 221.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors