ECODEvolutionary Classification of Protein Domains

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PDB 5YPS

X-RAY DIFFRACTION2.09 Å6 chains6 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AVacuolar protein sorting-associated protein 75view chain

1 domain

e5ypsA1(A:19-220)

Chain BVacuolar protein sorting-associated protein 75view chain

1 domain

e5ypsB1(B:20-219)

Chain CVacuolar protein sorting-associated protein 75view chain

1 domain

e5ypsC1(C:20-220)

Chain DVacuolar protein sorting-associated protein 75view chain

1 domain

e5ypsD1(D:20-219)

Chain EVacuolar protein sorting-associated protein 75view chain

1 domain

e5ypsE1(E:20-221)

Chain FVacuolar protein sorting-associated protein 75view chain

1 domain

e5ypsF1(F:20-220)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5ypsA1	A:19-220	NAP	4096 → 4096.1 → 4096.1.1
2	B	e5ypsB1	B:20-219	NAP	4096 → 4096.1 → 4096.1.1
3	C	e5ypsC1	C:20-220	NAP	4096 → 4096.1 → 4096.1.1
4	D	e5ypsD1	D:20-219	NAP	4096 → 4096.1 → 4096.1.1
5	E	e5ypsE1	E:20-221	NAP	4096 → 4096.1 → 4096.1.1
6	F	e5ypsF1	F:20-220	NAP	4096 → 4096.1 → 4096.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors