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PDB 5ZWO

ELECTRON MICROSCOPY60 chains80 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 0Pre-mRNA-splicing factor 38view chain
1 domain
Chain 1U2 snRNP component HSH155view chain
1 domain
Chain 4Protein HSH49view chain
2 domains
Chain 6RDS3 complex subunit 10view chain
1 domain
Chain aSmall nuclear ribonucleoprotein-associated protein Bview chain
1 domain
Chain bSmall nuclear ribonucleoprotein Sm D1view chain
1 domain
Chain cSmall nuclear ribonucleoprotein Sm D2view chain
1 domain
Chain dSmall nuclear ribonucleoprotein Sm D3view chain
1 domain
Chain eSmall nuclear ribonucleoprotein Eview chain
1 domain
Chain ESpliceosomal protein DIB1view chain
1 domain
Chain fSmall nuclear ribonucleoprotein Fview chain
1 domain
Chain gSmall nuclear ribonucleoprotein Gview chain
1 domain
Chain hSmall nuclear ribonucleoprotein-associated protein Bview chain
1 domain
Chain iSmall nuclear ribonucleoprotein Eview chain
1 domain
Chain jSmall nuclear ribonucleoprotein Fview chain
1 domain
Chain JU4/U6 small nuclear ribonucleoprotein PRP3view chain
2 domains
Chain kSmall nuclear ribonucleoprotein Gview chain
1 domain
Chain KU4/U6 small nuclear ribonucleoprotein PRP4view chain
1 domain
Chain lSmall nuclear ribonucleoprotein Sm D3view chain
1 domain
Chain LPre-mRNA-processing factor 31view chain
3 domains
Chain mSmall nuclear ribonucleoprotein Sm D1view chain
1 domain
Chain M13 kDa ribonucleoprotein-associated proteinview chain
1 domain
Chain nSmall nuclear ribonucleoprotein Sm D2view chain
1 domain
Chain NPre-mRNA-splicing factor 6view chain
1 domain
Chain oU2 small nuclear ribonucleoprotein A'view chain
1 domain
Chain pU2 small nuclear ribonucleoprotein B''view chain
1 domain
Chain PSmall nuclear ribonucleoprotein-associated protein Bview chain
1 domain
Chain qU6 snRNA-associated Sm-like protein LSm2view chain
1 domain
Chain QSmall nuclear ribonucleoprotein Sm D1view chain
1 domain
Chain rU6 snRNA-associated Sm-like protein LSm3view chain
1 domain
Chain RSmall nuclear ribonucleoprotein Sm D2view chain
1 domain
Chain sU6 snRNA-associated Sm-like protein LSm4view chain
1 domain
Chain SSmall nuclear ribonucleoprotein Sm D3view chain
1 domain
Chain tU6 snRNA-associated Sm-like protein LSm5view chain
1 domain
Chain TSmall nuclear ribonucleoprotein Eview chain
1 domain
Chain uPre-mRNA-splicing factor PRP9view chain
1 domain
Chain USmall nuclear ribonucleoprotein Fview chain
1 domain
Chain vPre-mRNA-splicing factor PRP11view chain
2 domains
Chain VSmall nuclear ribonucleoprotein Gview chain
1 domain
Chain wPre-mRNA-splicing factor PRP21view chain
1 domain
Chain xU6 snRNA-associated Sm-like protein LSm6view chain
1 domain
Chain XU2 snRNP component IST3view chain
1 domain
Chain yU6 snRNA-associated Sm-like protein LSm7view chain
1 domain
Chain zU6 snRNA-associated Sm-like protein LSm8view chain
1 domain
Chain ZPre-mRNA leakage protein 1view chain
1 domain

All Domains (80)

#ChainDomain IDRangeFamilyClassification
10e5zwo010:9-209PRP38109 → 109.50 → 109.50.1
21e5zwo111:156-971PPP2R1A-like_HEAT109 → 109.4 → 109.4.1
33e5zwo313:452-784,3:815-851Beta-prop_RSE1_2nd5 → 5.1 → 5.1.4
43e5zwo323:56-299,3:324-451,3:472-483MMS1_N5 → 5.1 → 5.1.4
53e5zwo333:852-890,3:918-1231CPSF_A5 → 5.1 → 5.1.4
63e5zwo343:1232-1261,3:1298-1361CPSF_A101 → 101.1 → 101.1.1
74e5zwo414:106-203RRM_1304 → 304.9 → 304.9.1
84e5zwo424:8-86RRM_1304 → 304.9 → 304.9.1
95e5zwo515:28-43,5:71-83377.1.1.0377 → 377.1 → 377.1.1
105e5zwo525:21-27,5:55-70377.1.1.0377 → 377.1 → 377.1.1
115e5zwo535:2-18,5:42-54,5:82-104PHF5377 → 377.1 → 377.1.1
126e5zwo616:1-84SF3b101106 → 1106.1 → 1106.1.1
13ae5zwoa1a:8-53,a:77-103LSM4 → 4.1 → 4.1.1
14Ae5zwoA1A:1575-1828U6-snRNA_bdg2008 → 2008.1 → 2008.1.1
15Ae5zwoA2A:2150-2401PROCT2492 → 2492.1 → 2492.1.1
16Ae5zwoA3A:1829-2085PRP8_domainIV2484 → 2484.1 → 2484.1.1
17Ae5zwoA4A:131-431,A:455-883PRO8NT,PROCN1038 → 1038.1 → 1038.1.1
18Ae5zwoA5A:1256-1574U6-snRNA_bdg,U5_2-snRNA_bdg4967 → 4967.1 → 4967.1.1
19Ae5zwoA6A:884-1255RRM_4304 → 304.48 → 304.48.1
20be5zwob1b:1-47,b:71-109LSM4 → 4.1 → 4.1.1
21ce5zwoc1c:20-110LSM4 → 4.1 → 4.1.1
22Ce5zwoC1C:588-676304.24.1.0304 → 304.24 → 304.24.1
23Ce5zwoC2C:457-510,C:530-5871.1.7.01 → 1.1 → 1.1.7
24Ce5zwoC3C:858-975EFG_C304 → 304.24 → 304.24.1
25Ce5zwoC4C:102-456GTP_EFTU2004 → 2004.1 → 2004.1.1
26Ce5zwoC5C:677-857EFG_IV212 → 212.1 → 212.1.1
27de5zwod1d:5-83LSM4 → 4.1 → 4.1.1
28De5zwoD1D:1334-1541DEAD2004 → 2004.1 → 2004.1.1
29De5zwoD2D:2050-2163Sec6311 → 11.1 → 11.1.1
30De5zwoD3D:1011-1142Sec634156 → 4156.1 → 4156.1.1
31De5zwoD4D:701-905Helicase_C2004 → 2004.1 → 2004.1.1
32De5zwoD5D:1741-1858SNRNP200_wHTH101 → 101.1 → 101.1.2
33De5zwoD6D:1199-1333Sec6311 → 11.1 → 11.1.1
34De5zwoD7D:1542-17402004.1.1.02004 → 2004.1 → 2004.1.1
35De5zwoD8D:1859-1991Sec634156 → 4156.1 → 4156.1.1
36De5zwoD9D:447-700DEAD2004 → 2004.1 → 2004.1.1
37De5zwoD10D:1992-2049102.5.1.0102 → 102.5 → 102.5.1
38De5zwoD11D:906-1010SNRNP200_wHTH101 → 101.1 → 101.1.2
39De5zwoD12D:1143-1198102.5.1.0102 → 102.5 → 102.5.1
40ee5zwoe1e:10-93LSM4 → 4.1 → 4.1.1
41Ee5zwoE1E:3-140DIM12485 → 2485.1 → 2485.1.1
42fe5zwof1f:11-83LSM4 → 4.1 → 4.1.1
43ge5zwog1g:1-76LSM4 → 4.1 → 4.1.1
44he5zwoh1h:6-53,h:77-102LSM4 → 4.1 → 4.1.1
45ie5zwoi1i:10-92LSM4 → 4.1 → 4.1.1
46je5zwoj1j:12-83LSM4 → 4.1 → 4.1.1
47Je5zwoJ1J:332-466Prp3_C304 → 304.110 → 304.110.1
48Je5zwoJ2J:140-174,J:217-331PRP31040 → 1040.1 → 1040.1.1
49ke5zwok1k:2-76LSM4 → 4.1 → 4.1.1
50Ke5zwoK1K:109-465WD405 → 5.1 → 5.1.4
51le5zwol1l:4-84LSM4 → 4.1 → 4.1.1
52Le5zwoL1L:225-348Nop102 → 102.1 → 102.1.4
53Le5zwoL2L:349-462Prp31_C1039 → 1039.1 → 1039.1.1
54Le5zwoL3L:39-224Nop606 → 606.1 → 606.1.1
55me5zwom1m:1-48,m:76-109LSM4 → 4.1 → 4.1.1
56Me5zwoM1M:1-126Ribosomal_L7Ae301 → 301.1 → 301.1.1
57ne5zwon1n:44-108LSM4 → 4.1 → 4.1.1
58Ne5zwoN1N:155-178,N:211-899PRP6_TPR109 → 109.4 → 109.4.1
59oe5zwoo1o:1-162LRR_9207 → 207.1 → 207.1.1
60pe5zwop1p:29-103RRM_1304 → 304.9 → 304.9.1
61Pe5zwoP1P:12-54,P:76-102LSM4 → 4.1 → 4.1.1
62qe5zwoq1q:1-92LSM4 → 4.1 → 4.1.1
63Qe5zwoQ1Q:1-48,Q:78-146LSM4 → 4.1 → 4.1.1
64re5zwor1r:3-79LSM4 → 4.1 → 4.1.1
65Re5zwoR1R:17-108LSM4 → 4.1 → 4.1.1
66se5zwos1s:1-88LSM4 → 4.1 → 4.1.1
67Se5zwoS1S:4-85LSM4 → 4.1 → 4.1.1
68te5zwot1t:4-85LSM4 → 4.1 → 4.1.1
69Te5zwoT1T:10-93LSM4 → 4.1 → 4.1.1
70ue5zwou1u:1-3783403.1.1.03403 → 3403.1 → 3403.1.1
71Ue5zwoU1U:12-84LSM4 → 4.1 → 4.1.1
72ve5zwov1v:149-253SF3A2319 → 319.2 → 319.2.1
73ve5zwov2v:34-105zf-met386 → 386.1 → 386.1.1
74Ve5zwoV1V:2-76LSM4 → 4.1 → 4.1.1
75we5zwow1w:89-228Surp574 → 574.1 → 574.1.1
76xe5zwox1x:11-84LSM4 → 4.1 → 4.1.1
77Xe5zwoX1X:2-129RRM_1304 → 304.9 → 304.9.1
78ye5zwoy1y:26-105LSM4 → 4.1 → 4.1.1
79ze5zwoz1z:3-67LSM4 → 4.1 → 4.1.1
80Ze5zwoZ1Z:28-204FHA73 → 73.1 → 73.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors