ECODEvolutionary Classification of Protein Domains

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PDB 5ZYA

ELECTRON MICROSCOPY4 chains7 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ASplicing factor 3B subunit 3view chain

4 domains

e5zyaA1(A:0-403)e5zyaA2(A:1133-1222)e5zyaA3(A:404-441,A:773-1132)e5zyaA4(A:442-772)

Chain BSplicing factor 3B subunit 5view chain

1 domain

e5zyaB1(B:16-81)

Chain CSplicing factor 3B subunit 1view chain

1 domain

e5zyaC1(C:490-1304)

Chain DPHD finger-like domain-containing protein 5Aview chain

1 domain

e5zyaD1(D:7-91)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5zyaA1	A:0-403	MMS1_N	5 → 5.1 → 5.1.4
2	A	e5zyaA2	A:1133-1222	CPSF_A	101 → 101.1 → 101.1.1
3	A	e5zyaA3	A:404-441,A:773-1132	CPSF_A	5 → 5.1 → 5.1.4
4	A	e5zyaA4	A:442-772	Beta-prop_RSE1_2nd	5 → 5.1 → 5.1.4
5	B	e5zyaB1	B:16-81	SF3b10	1106 → 1106.1 → 1106.1.1
6	C	e5zyaC1	C:490-1304	PPP2R1A-like_HEAT	109 → 109.4 → 109.4.1
7	D	e5zyaD1	D:7-91	PHF5	377 → 377.1 → 377.1.4

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors