ECODEvolutionary Classification of Protein Domains

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PDB 6AQR

X-RAY DIFFRACTION2.10 Å5 chains6 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AUbiquitin carboxyl-terminal hydrolase 8view chain

2 domains

e6aqrA1(A:134-471)e6aqrA2(A:2-133)

Chain BTranscription and mRNA export factor SUS1view chain

1 domain

e6aqrB1(B:5-95)

Chain CSAGA-associated factor 11view chain

1 domain

e6aqrC1(C:7-94)

Chain DPolyubiquitin-Cview chain

1 domain

e6aqrD1(D:1-76)

Chain ESAGA-associated factor 73view chain

1 domain

e6aqrE1(E:4-95)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6aqrA1	A:134-471	UCH	219 → 219.1 → 219.1.1
2	A	e6aqrA2	A:2-133	zf-UBP	376 → 376.1 → 376.1.1
3	B	e6aqrB1	B:5-95	EnY2	4336 → 4336.2 → 4336.2.1
4	C	e6aqrC1	C:7-94	Sgf11,Sgf11_N	386 → 386.1 → 386.1.1
5	D	e6aqrD1	D:1-76	ubiquitin	221 → 221.1 → 221.1.1
6	E	e6aqrE1	E:4-95	zf_C2H2_13	386 → 386.1 → 386.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors