ECODEvolutionary Classification of Protein Domains

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PDB 6AVG

X-RAY DIFFRACTION2.60 Å10 chains14 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ABeta-2-microglobulinview chain

1 domain

e6avgA1(A:1-99)

Chain BT-cell receptor alpha variable 4,TCR alpha chainview chain

2 domains

e6avgB1(B:5-116)e6avgB2(B:117-200)

Chain CT-cell receptor alpha variable 4,TCR alpha chainview chain

2 domains

e6avgC1(C:5-116)e6avgC2(C:117-200)

Chain DT-cell receptor beta variable 9,TCR beta chainview chain

2 domains

e6avgD1(D:3-121)e6avgD2(D:122-247)

Chain ET-cell receptor beta variable 9,TCR beta chainview chain

2 domains

e6avgE1(E:122-247)e6avgE2(E:3-121)

Chain FHLA class I histocompatibility antigen, B-7 alpha chainview chain

2 domains

e6avgF1(F:1-181)e6avgF2(F:182-275)

Chain GHLA class I histocompatibility antigen, B-7 alpha chainview chain

2 domains

e6avgG1(G:182-274)e6avgG2(G:1-181)

Chain HBeta-2-microglobulinview chain

1 domain

e6avgH1(H:1-99)

All Domains (14)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6avgA1	A:1-99	C1-set	11 → 11.1 → 11.1.1
2	B	e6avgB1	B:5-116	V-set	11 → 11.1 → 11.1.1
3	B	e6avgB2	B:117-200	DUF1968	11 → 11.1 → 11.1.1
4	C	e6avgC1	C:5-116	V-set	11 → 11.1 → 11.1.1
5	C	e6avgC2	C:117-200	DUF1968	11 → 11.1 → 11.1.1
6	D	e6avgD1	D:3-121	V-set	11 → 11.1 → 11.1.1
7	D	e6avgD2	D:122-247	C1-set	11 → 11.1 → 11.1.1
8	E	e6avgE1	E:122-247	C1-set	11 → 11.1 → 11.1.1
9	E	e6avgE2	E:3-121	V-set	11 → 11.1 → 11.1.1
10	F	e6avgF1	F:1-181	MHC_I	233 → 233.1 → 233.1.1
11	F	e6avgF2	F:182-275	C1-set	11 → 11.1 → 11.1.1
12	G	e6avgG1	G:182-274	C1-set	11 → 11.1 → 11.1.1
13	G	e6avgG2	G:1-181	MHC_I	233 → 233.1 → 233.1.1
14	H	e6avgH1	H:1-99	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors