ECODEvolutionary Classification of Protein Domains

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PDB 6CYF

X-RAY DIFFRACTION2.77 Å12 chains20 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AType III secretion system proteinview chain

1 domain

e6cyfA1(A:123-249)

Chain BType III secretion system proteinview chain

1 domain

e6cyfB1(B:123-248)

Chain CIgG1 antibody, kappa light chainview chain

2 domains

e6cyfC1(C:109-214)e6cyfC2(C:1-108)

Chain DIgG1 antibody, heavy chain fragmentview chain

2 domains

e6cyfD1(D:2-124)e6cyfD2(D:125-227)

Chain EIgG1 antibody, kappa light chainview chain

2 domains

e6cyfE1(E:1-108)e6cyfE2(E:109-214)

Chain FIgG1 antibody, heavy chain fragmentview chain

2 domains

e6cyfF1(F:125-225)e6cyfF2(F:1-124)

Chain IType III secretion system proteinview chain

1 domain

e6cyfI1(I:123-249)

Chain LIgG1 antibody, kappa light chainview chain

2 domains

e6cyfL1(L:1-108)e6cyfL2(L:109-214)

Chain MIgG1 antibody, heavy chain fragmentview chain

2 domains

e6cyfM1(M:125-225)e6cyfM2(M:1-124)

Chain QType III secretion system proteinview chain

1 domain

e6cyfQ1(Q:122-248)

Chain TIgG1 antibody, kappa light chainview chain

2 domains

e6cyfT1(T:1-108)e6cyfT2(T:109-214)

Chain UIgG1 antibody, heavy chain fragmentview chain

2 domains

e6cyfU1(U:125-227)e6cyfU2(U:1-124)

All Domains (20)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6cyfA1	A:123-249	LcrV	4055 → 4055.1 → 4055.1.1
2	B	e6cyfB1	B:123-248	LcrV	4055 → 4055.1 → 4055.1.1
3	C	e6cyfC1	C:109-214	C1-set	11 → 11.1 → 11.1.1
4	C	e6cyfC2	C:1-108	V-set	11 → 11.1 → 11.1.1
5	D	e6cyfD1	D:2-124	V-set	11 → 11.1 → 11.1.1
6	D	e6cyfD2	D:125-227	C1-set	11 → 11.1 → 11.1.1
7	E	e6cyfE1	E:1-108	V-set	11 → 11.1 → 11.1.1
8	E	e6cyfE2	E:109-214	C1-set	11 → 11.1 → 11.1.1
9	F	e6cyfF1	F:125-225	C1-set	11 → 11.1 → 11.1.1
10	F	e6cyfF2	F:1-124	V-set	11 → 11.1 → 11.1.1
11	I	e6cyfI1	I:123-249	LcrV	4055 → 4055.1 → 4055.1.1
12	L	e6cyfL1	L:1-108	V-set	11 → 11.1 → 11.1.1
13	L	e6cyfL2	L:109-214	C1-set	11 → 11.1 → 11.1.1
14	M	e6cyfM1	M:125-225	C1-set	11 → 11.1 → 11.1.1
15	M	e6cyfM2	M:1-124	V-set	11 → 11.1 → 11.1.1
16	Q	e6cyfQ1	Q:122-248	LcrV	4055 → 4055.1 → 4055.1.1
17	T	e6cyfT1	T:1-108	V-set	11 → 11.1 → 11.1.1
18	T	e6cyfT2	T:109-214	C1-set	11 → 11.1 → 11.1.1
19	U	e6cyfU1	U:125-227	C1-set	11 → 11.1 → 11.1.1
20	U	e6cyfU2	U:1-124	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors