ECODEvolutionary Classification of Protein Domains

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PDB 6ET5

ELECTRON MICROSCOPY54 chains39 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 1Light-harvesting protein B-1015 beta chainview chain

1 domain

e6et511(1:1-55)

Chain 3Light-harvesting protein B-1015 alpha chainview chain

1 domain

e6et531(3:1-58)

Chain 4Light-harvesting protein B-1015 beta chainview chain

1 domain

e6et541(4:1-55)

Chain 6Light-harvesting protein B-1015 alpha chainview chain

1 domain

e6et561(6:1-58)

Chain 7Light-harvesting protein B-1015 beta chainview chain

1 domain

e6et571(7:1-55)

Chain bLight-harvesting protein B-1015 alpha chainview chain

1 domain

e6et5b1(b:1-58)

Chain cLight-harvesting protein B-1015 beta chainview chain

1 domain

e6et5c1(c:1-55)

Chain CPhotosynthetic reaction center cytochrome c subunitview chain

1 domain

e6et5C1(C:1-333)

Chain eLight-harvesting protein B-1015 alpha chainview chain

1 domain

e6et5e1(e:1-58)

Chain fLight-harvesting protein B-1015 beta chainview chain

1 domain

e6et5f1(f:1-55)

Chain FLight-harvesting protein B-1015 alpha chainview chain

1 domain

e6et5F1(F:1-58)

Chain GLight-harvesting protein B-1015 beta chainview chain

1 domain

e6et5G1(G:1-55)

Chain hLight-harvesting protein B-1015 alpha chainview chain

1 domain

e6et5h1(h:1-58)

Chain HReaction center protein H chainview chain

2 domains

e6et5H1(H:37-258)e6et5H2(H:1-36)

Chain iLight-harvesting protein B-1015 beta chainview chain

1 domain

e6et5i1(i:1-55)

Chain kLight-harvesting protein B-1015 alpha chainview chain

1 domain

e6et5k1(k:1-58)

Chain KLight-harvesting protein B-1015 alpha chainview chain

1 domain

e6et5K1(K:1-58)

Chain lLight-harvesting protein B-1015 beta chainview chain

1 domain

e6et5l1(l:1-55)

Chain LReaction center protein L chainview chain

1 domain

e6et5L1(L:1-273)

Chain MReaction center protein M chainview chain

1 domain

e6et5M1(M:1-301)

Chain nLight-harvesting protein B-1015 alpha chainview chain

1 domain

e6et5n1(n:1-58)

Chain NLight-harvesting protein B-1015 beta chainview chain

1 domain

e6et5N1(N:1-55)

Chain oLight-harvesting protein B-1015 beta chainview chain

1 domain

e6et5o1(o:1-55)

Chain PLight-harvesting protein B-1015 alpha chainview chain

1 domain

e6et5P1(P:1-58)

Chain qLight-harvesting protein B-1015 alpha chainview chain

1 domain

e6et5q1(q:1-58)

Chain QLight-harvesting protein B-1015 beta chainview chain

1 domain

e6et5Q1(Q:1-55)

Chain rLight-harvesting protein B-1015 beta chainview chain

1 domain

e6et5r1(r:1-55)

Chain SLight-harvesting protein B-1015 alpha chainview chain

1 domain

e6et5S1(S:1-58)

Chain tLight-harvesting protein B-1015 alpha chainview chain

1 domain

e6et5t1(t:1-58)

Chain TLight-harvesting protein B-1015 beta chainview chain

1 domain

e6et5T1(T:1-55)

Chain uLight-harvesting protein B-1015 beta chainview chain

1 domain

e6et5u1(u:1-55)

Chain VLight-harvesting protein B-1015 alpha chainview chain

1 domain

e6et5V1(V:1-58)

Chain wLight-harvesting protein B-1015 alpha chainview chain

1 domain

e6et5w1(w:1-58)

Chain WLight-harvesting protein B-1015 beta chainview chain

1 domain

e6et5W1(W:1-55)

Chain xLight-harvesting protein B-1015 beta chainview chain

1 domain

e6et5x1(x:1-55)

Chain YLight-harvesting protein B-1015 alpha chainview chain

1 domain

e6et5Y1(Y:1-58)

Chain zLight-harvesting protein B-1015 alpha chainview chain

1 domain

e6et5z1(z:1-58)

Chain ZLight-harvesting protein B-1015 beta chainview chain

1 domain

e6et5Z1(Z:1-55)

All Domains (39)

#	Chain	Domain ID	Range	Family	Classification
1	1	e6et511	1:1-55	LHC	5074 → 5074.1 → 5074.1.1
2	3	e6et531	3:1-58	LHC	5074 → 5074.1 → 5074.1.1
3	4	e6et541	4:1-55	LHC	5074 → 5074.1 → 5074.1.1
4	6	e6et561	6:1-58	LHC	5074 → 5074.1 → 5074.1.1
5	7	e6et571	7:1-55	LHC	5074 → 5074.1 → 5074.1.1
6	b	e6et5b1	b:1-58	LHC	5074 → 5074.1 → 5074.1.1
7	c	e6et5c1	c:1-55	LHC	5074 → 5074.1 → 5074.1.1
8	C	e6et5C1	C:1-333	CytoC_RC	139 → 139.3 → 139.3.1
9	e	e6et5e1	e:1-58	LHC	5074 → 5074.1 → 5074.1.1
10	f	e6et5f1	f:1-55	LHC	5074 → 5074.1 → 5074.1.1
11	F	e6et5F1	F:1-58	LHC	5074 → 5074.1 → 5074.1.1
12	G	e6et5G1	G:1-55	LHC	5074 → 5074.1 → 5074.1.1
13	h	e6et5h1	h:1-58	LHC	5074 → 5074.1 → 5074.1.1
14	H	e6et5H1	H:37-258	Photosynthetic reaction centre, H-chain N-terminal region / PRC-barrel domain	4 → 4.6 → 4.6.1
15	H	e6et5H2	H:1-36	5002.1.1.0	5002 → 5002.1 → 5002.1.1
16	i	e6et5i1	i:1-55	LHC	5074 → 5074.1 → 5074.1.1
17	k	e6et5k1	k:1-58	LHC	5074 → 5074.1 → 5074.1.1
18	K	e6et5K1	K:1-58	LHC	5074 → 5074.1 → 5074.1.1
19	l	e6et5l1	l:1-55	LHC	5074 → 5074.1 → 5074.1.1
20	L	e6et5L1	L:1-273	Photo_RC	5037 → 5037.1 → 5037.1.1
21	M	e6et5M1	M:1-301	Photo_RC	5037 → 5037.1 → 5037.1.1
22	n	e6et5n1	n:1-58	LHC	5074 → 5074.1 → 5074.1.1
23	N	e6et5N1	N:1-55	LHC	5074 → 5074.1 → 5074.1.1
24	o	e6et5o1	o:1-55	LHC	5074 → 5074.1 → 5074.1.1
25	P	e6et5P1	P:1-58	LHC	5074 → 5074.1 → 5074.1.1
26	q	e6et5q1	q:1-58	LHC	5074 → 5074.1 → 5074.1.1
27	Q	e6et5Q1	Q:1-55	LHC	5074 → 5074.1 → 5074.1.1
28	r	e6et5r1	r:1-55	LHC	5074 → 5074.1 → 5074.1.1
29	S	e6et5S1	S:1-58	LHC	5074 → 5074.1 → 5074.1.1
30	t	e6et5t1	t:1-58	LHC	5074 → 5074.1 → 5074.1.1
31	T	e6et5T1	T:1-55	LHC	5074 → 5074.1 → 5074.1.1
32	u	e6et5u1	u:1-55	LHC	5074 → 5074.1 → 5074.1.1
33	V	e6et5V1	V:1-58	LHC	5074 → 5074.1 → 5074.1.1
34	w	e6et5w1	w:1-58	LHC	5074 → 5074.1 → 5074.1.1
35	W	e6et5W1	W:1-55	LHC	5074 → 5074.1 → 5074.1.1
36	x	e6et5x1	x:1-55	LHC	5074 → 5074.1 → 5074.1.1
37	Y	e6et5Y1	Y:1-58	LHC	5074 → 5074.1 → 5074.1.1
38	z	e6et5z1	z:1-58	LHC	5074 → 5074.1 → 5074.1.1
39	Z	e6et5Z1	Z:1-55	LHC	5074 → 5074.1 → 5074.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors