ECODEvolutionary Classification of Protein Domains

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PDB 6IDK

ELECTRON MICROSCOPY12 chains15 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AEnvelope proteinview chain

2 domains

e6idkA1(A:291-392)e6idkA2(A:2-290)

Chain BEnvelope proteinview chain

2 domains

e6idkB1(B:2-290)e6idkB2(B:291-392)

Chain CEnvelope proteinview chain

2 domains

e6idkC1(C:291-392)e6idkC2(C:2-290)

Chain DPremembrane proteinview chain

1 domain

e6idkD1(D:1-79)

Chain EPremembrane proteinview chain

1 domain

e6idkE1(E:1-79)

Chain FPremembrane proteinview chain

1 domain

e6idkF1(F:1-79)

Chain HFab 1H10 heavy chain (V-region)view chain

1 domain

e6idkH1(H:1-97)

Chain IFab 1H10 heavy chain (V-region)view chain

1 domain

e6idkI1(I:1-97)

Chain JFab 1H10 light chain (V-region)view chain

1 domain

e6idkJ1(J:3-110)

Chain LFab 1H10 light chain (V-region)view chain

1 domain

e6idkL1(L:3-110)

Chain MFab 1H10 heavy chain (V-region)view chain

1 domain

e6idkM1(M:1-97)

Chain NFab 1H10 light chain (V-region)view chain

1 domain

e6idkN1(N:3-110)

All Domains (15)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6idkA1	A:291-392	Flavi_glycop_C	11 → 11.1 → 11.1.1
2	A	e6idkA2	A:2-290	Flavi_glycoprot	5090 → 5090.1 → 5090.1.1
3	B	e6idkB1	B:2-290	Flavi_glycoprot	5090 → 5090.1 → 5090.1.1
4	B	e6idkB2	B:291-392	Flavi_glycop_C	11 → 11.1 → 11.1.1
5	C	e6idkC1	C:291-392	Flavi_glycop_C	11 → 11.1 → 11.1.1
6	C	e6idkC2	C:2-290	Flavi_glycoprot	5090 → 5090.1 → 5090.1.1
7	D	e6idkD1	D:1-79	Flavi_propep	67 → 67.1 → 67.1.1
8	E	e6idkE1	E:1-79	Flavi_propep	67 → 67.1 → 67.1.1
9	F	e6idkF1	F:1-79	Flavi_propep	67 → 67.1 → 67.1.1
10	H	e6idkH1	H:1-97	V-set	11 → 11.1 → 11.1.1
11	I	e6idkI1	I:1-97	V-set	11 → 11.1 → 11.1.1
12	J	e6idkJ1	J:3-110	V-set	11 → 11.1 → 11.1.1
13	L	e6idkL1	L:3-110	V-set	11 → 11.1 → 11.1.1
14	M	e6idkM1	M:1-97	V-set	11 → 11.1 → 11.1.1
15	N	e6idkN1	N:3-110	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors