ECODEvolutionary Classification of Protein Domains

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PDB 6ILM

ELECTRON MICROSCOPY6 chains7 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ACapsid protein VP1view chain

1 domain

e6ilmA1(A:1-289)

Chain BCapsid protein VP2view chain

1 domain

e6ilmB1(B:10-261)

Chain CCapsid protein VP3view chain

1 domain

e6ilmC1(C:1-238)

Chain DCapsid protein VP4view chain

1 domain

e6ilmD1(D:1-68)

Chain EIgG receptor FcRn large subunit p51view chain

2 domains

e6ilmE1(E:177-267)e6ilmE2(E:5-176)

Chain FBeta-2-microglobulinview chain

1 domain

e6ilmF1(F:1-99)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6ilmA1	A:1-289	Rhv_5	10 → 10.2 → 10.2.1
2	B	e6ilmB1	B:10-261	Rhv	10 → 10.2 → 10.2.1
3	C	e6ilmC1	C:1-238	Rhv	10 → 10.2 → 10.2.1
4	D	e6ilmD1	D:1-68	Pico_P1A	10 → 10.2 → 10.2.1
5	E	e6ilmE1	E:177-267	C1-set	11 → 11.1 → 11.1.1
6	E	e6ilmE2	E:5-176	MHC_I	233 → 233.1 → 233.1.1
7	F	e6ilmF1	F:1-99	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors