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PDB 6J40

ELECTRON MICROSCOPY70 chains60 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 11Fucoxanthin chlorophyll a/c-binding protein Lhcf1, FCP1view chain
1 domain
Chain 12Fucoxanthin chlorophyll a/c-binding protein Lhcf1, FCP1view chain
1 domain
Chain 13Fucoxanthin chlorophyll a/c-binding protein Lhcf1, FCP1view chain
1 domain
Chain 14Fucoxanthin chlorophyll a/c-binding protein Lhcf1, FCP1view chain
1 domain
Chain 15Fucoxanthin chlorophyll a/c-binding protein Lhcf1, FCP1view chain
1 domain
Chain 16Fucoxanthin chlorophyll a/c-binding protein Lhcf1, FCP1view chain
1 domain
Chain 17Fucoxanthin chlorophyll a/c-binding protein Lhcf1, FCP1view chain
1 domain
Chain 18Fucoxanthin chlorophyll a/c-binding protein Lhcf1, FCP1view chain
1 domain
Chain 31Fucoxanthin chlorophyll a/c-binding protein Lhcf1, FCP1view chain
1 domain
Chain 32Fucoxanthin chlorophyll a/c-binding protein Lhcf1, FCP1view chain
1 domain
Chain 33Fucoxanthin chlorophyll a/c-binding protein Lhcf1, FCP1view chain
1 domain
Chain 34Fucoxanthin chlorophyll a/c-binding protein Lhcf1, FCP1view chain
1 domain
Chain 35Fucoxanthin chlorophyll a/c-binding protein Lhcf1, FCP1view chain
1 domain
Chain 36Fucoxanthin chlorophyll a/c-binding protein Lhcf1, FCP1view chain
1 domain
Chain 37Fucoxanthin chlorophyll a/c-binding protein Lhcf1, FCP1view chain
1 domain
Chain 38Fucoxanthin chlorophyll a/c-binding protein Lhcf1, FCP1view chain
1 domain
Chain aPhotosystem II reaction center protein D1view chain
1 domain
Chain APhotosystem II reaction center protein D1view chain
1 domain
Chain bPhotosystem II chlorophyll protein CP47view chain
2 domains
Chain BPhotosystem II chlorophyll protein CP47view chain
2 domains
Chain cPhotosystem II chlorophyll protein CP43view chain
1 domain
Chain CPhotosystem II chlorophyll protein CP43view chain
1 domain
Chain dPhotosystem II reaction center protein D2view chain
1 domain
Chain DPhotosystem II reaction center protein D2view chain
1 domain
Chain eCytochrome b559 subunit alphaview chain
1 domain
Chain ECytochrome b559 subunit alphaview chain
1 domain
Chain fCytochrome b559 subunit betaview chain
1 domain
Chain FCytochrome b559 subunit betaview chain
1 domain
Chain hPhotosystem II reaction center protein Hview chain
1 domain
Chain HPhotosystem II reaction center protein Hview chain
1 domain
Chain iPhotosystem II reaction center protein Iview chain
1 domain
Chain IPhotosystem II reaction center protein Iview chain
1 domain
Chain jPhotosystem II reaction center protein Jview chain
1 domain
Chain JPhotosystem II reaction center protein Jview chain
1 domain
Chain kPhotosystem II reaction center protein Kview chain
1 domain
Chain KPhotosystem II reaction center protein Kview chain
1 domain
Chain lPhotosystem II reaction center protein Lview chain
1 domain
Chain LPhotosystem II reaction center protein Lview chain
1 domain
Chain mPhotosystem II reaction center protein Mview chain
1 domain
Chain MPhotosystem II reaction center protein Mview chain
1 domain
Chain oExtrinsic protein in photosystem IIview chain
1 domain
Chain OExtrinsic protein in photosystem IIview chain
1 domain
Chain qExtrinsic protein in photosystem IIview chain
1 domain
Chain QExtrinsic protein in photosystem IIview chain
1 domain
Chain tPhotosystem II reaction center protein Tview chain
1 domain
Chain TPhotosystem II reaction center protein Tview chain
1 domain
Chain uExtrinsic protein in photosystem IIview chain
1 domain
Chain UExtrinsic protein in photosystem IIview chain
1 domain
Chain vCytochrome c-550view chain
1 domain
Chain VCytochrome c-550view chain
1 domain
Chain wPhotosystem II reaction center protein Wview chain
1 domain
Chain WPhotosystem II reaction center protein Wview chain
1 domain
Chain xPhotosystem II reaction center X proteinview chain
1 domain
Chain XPhotosystem II reaction center X proteinview chain
1 domain
Chain yPhotosystem II reaction center protein Ycf12view chain
1 domain
Chain YPhotosystem II reaction center protein Ycf12view chain
1 domain
Chain zPhotosystem II reaction center protein Zview chain
1 domain
Chain ZPhotosystem II reaction center protein Zview chain
1 domain

All Domains (60)

#ChainDomain IDRangeFamilyClassification
111e6j4011111:31-206Chloroa_b-bind5077 → 5077.1 → 5077.1.1
212e6j4012112:31-206Chloroa_b-bind5077 → 5077.1 → 5077.1.1
313e6j4013113:31-206Chloroa_b-bind5077 → 5077.1 → 5077.1.1
414e6j4014114:31-206Chloroa_b-bind5077 → 5077.1 → 5077.1.1
515e6j4015115:31-206Chloroa_b-bind5077 → 5077.1 → 5077.1.1
616e6j4016116:31-206Chloroa_b-bind5077 → 5077.1 → 5077.1.1
717e6j4017117:31-206Chloroa_b-bind5077 → 5077.1 → 5077.1.1
818e6j4018118:31-206Chloroa_b-bind5077 → 5077.1 → 5077.1.1
931e6j4031131:31-206Chloroa_b-bind5077 → 5077.1 → 5077.1.1
1032e6j4032132:31-206Chloroa_b-bind5077 → 5077.1 → 5077.1.1
1133e6j4033133:31-206Chloroa_b-bind5077 → 5077.1 → 5077.1.1
1234e6j4034134:31-206Chloroa_b-bind5077 → 5077.1 → 5077.1.1
1335e6j4035135:31-206Chloroa_b-bind5077 → 5077.1 → 5077.1.1
1436e6j4036136:31-206Chloroa_b-bind5077 → 5077.1 → 5077.1.1
1537e6j4037137:31-206Chloroa_b-bind5077 → 5077.1 → 5077.1.1
1638e6j4038138:31-206Chloroa_b-bind5077 → 5077.1 → 5077.1.1
17ae6j40a1a:11-344Photo_RC5037 → 5037.1 → 5037.1.1
18Ae6j40A1A:11-344Photo_RC5037 → 5037.1 → 5037.1.1
19be6j40b1b:2-328,b:445-485PSII5075 → 5075.1 → 5075.1.1
20be6j40b2b:329-444PSII3744 → 3744.1 → 3744.1.1
21Be6j40B1B:329-444PSII3744 → 3744.1 → 3744.1.1
22Be6j40B2B:2-328,B:445-485PSII5075 → 5075.1 → 5075.1.1
23ce6j40c1c:21-471PSII5075 → 5075.1 → 5075.1.1
24Ce6j40C1C:21-471PSII5075 → 5075.1 → 5075.1.1
25de6j40d1d:11-351Photo_RC5037 → 5037.1 → 5037.1.1
26De6j40D1D:11-351Photo_RC5037 → 5037.1 → 5037.1.1
27ee6j40e1e:9-83Cytochrom_B559,Cytochrom_B559a5036 → 5036.1 → 5036.1.1
28Ee6j40E1E:9-83Cytochrom_B559,Cytochrom_B559a5036 → 5036.1 → 5036.1.1
29fe6j40f1f:16-43Cytochrom_B5595036 → 5036.1 → 5036.1.1
30Fe6j40F1F:16-43Cytochrom_B5595036 → 5036.1 → 5036.1.1
31he6j40h1h:2-67PsbH5032 → 5032.1 → 5032.1.1
32He6j40H1H:2-67PsbH5032 → 5032.1 → 5032.1.1
33ie6j40i1i:1-35PsbI5035 → 5035.1 → 5035.1.1
34Ie6j40I1I:1-35PsbI5035 → 5035.1 → 5035.1.1
35je6j40j1j:6-39PsbJ5031 → 5031.1 → 5031.1.1
36Je6j40J1J:6-39PsbJ5031 → 5031.1 → 5031.1.1
37ke6j40k1k:8-44PsbK5034 → 5034.1 → 5034.1.1
38Ke6j40K1K:8-44PsbK5034 → 5034.1 → 5034.1.1
39le6j40l1l:1-38PsbL5030 → 5030.1 → 5030.1.1
40Le6j40L1L:1-38PsbL5030 → 5030.1 → 5030.1.1
41me6j40m1m:2-435033.1.1.05033 → 5033.1 → 5033.1.1
42Me6j40M1M:2-435033.1.1.05033 → 5033.1 → 5033.1.1
43oe6j40o1o:3-247MSP5084 → 5084.1 → 5084.1.1
44Oe6j40O1O:3-247MSP5084 → 5084.1 → 5084.1.1
45qe6j40q1q:70-206601.18.1.0601 → 601.18 → 601.18.1
46Qe6j40Q1Q:70-206601.18.1.0601 → 601.18 → 601.18.1
47te6j40t1t:1-30PsbT3390 → 3390.1 → 3390.1.1
48Te6j40T1T:1-30PsbT3390 → 3390.1 → 3390.1.1
49ue6j40u1u:10-102PsbU102 → 102.1 → 102.1.1
50Ue6j40U1U:10-102PsbU102 → 102.1 → 102.1.1
51ve6j40v1v:2-137Cytochrom_C550107 → 107.1 → 107.1.1
52Ve6j40V1V:2-137Cytochrom_C550107 → 107.1 → 107.1.1
53we6j40w1w:20-711084.1.1.01084 → 1084.1 → 1084.1.1
54We6j40W1W:20-711084.1.1.01084 → 1084.1 → 1084.1.1
55xe6j40x1x:1-37PsbX3493 → 3493.1 → 3493.1.1
56Xe6j40X1X:1-37PsbX3493 → 3493.1 → 3493.1.1
57ye6j40y1y:1-34PSII_Ycf123379 → 3379.1 → 3379.1.1
58Ye6j40Y1Y:1-34PSII_Ycf123379 → 3379.1 → 3379.1.1
59ze6j40z1z:1-59Ycf95044 → 5044.1 → 5044.1.1
60Ze6j40Z1Z:1-59Ycf95044 → 5044.1 → 5044.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors