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PDB 6M62

ELECTRON MICROSCOPY58 chains56 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain a60S ribosomal protein L28view chain
1 domain
Chain A60S ribosomal protein L2-Aview chain
2 domains
Chain bNucleolar GTP-binding protein 1view chain
2 domains
Chain B60S ribosomal protein L3view chain
1 domain
Chain c60S ribosomal protein L30view chain
1 domain
Chain C60S ribosomal protein L4-Aview chain
2 domains
Chain d60S ribosomal protein L31-Aview chain
1 domain
Chain D60S ribosomal protein L5view chain
1 domain
Chain e60S ribosomal protein L32view chain
1 domain
Chain E60S ribosomal protein L6-Aview chain
1 domain
Chain f60S ribosomal protein L33-Aview chain
1 domain
Chain F60S ribosomal protein L7-Aview chain
1 domain
Chain g60S ribosomal protein L34-Aview chain
1 domain
Chain G60S ribosomal protein L8-Aview chain
1 domain
Chain h60S ribosomal protein L35-Aview chain
1 domain
Chain H60S ribosomal protein L9-Aview chain
2 domains
Chain i60S ribosomal protein L36-Aview chain
1 domain
Chain IBud site selection protein 20view chain
1 domain
Chain j60S ribosomal protein L37-Aview chain
1 domain
Chain J60S ribosomal protein L11-Aview chain
1 domain
Chain k60S ribosomal protein L38view chain
1 domain
Chain KProteasome-interacting protein CIC1view chain
2 domains
Chain l60S ribosomal protein L39view chain
1 domain
Chain L60S ribosomal protein L13-Aview chain
1 domain
Chain M60S ribosomal protein L14-Aview chain
1 domain
Chain N60S ribosomal protein L15-Aview chain
1 domain
Chain O60S ribosomal protein L16-Aview chain
1 domain
Chain p60S ribosomal protein L43-Aview chain
1 domain
Chain P60S ribosomal protein L17-Aview chain
1 domain
Chain Q60S ribosomal protein L18-Aview chain
1 domain
Chain R60S ribosomal protein L19-Aview chain
2 domains
Chain sNuclear GTP-binding protein NUG1view chain
1 domain
Chain S60S ribosomal protein L20-Aview chain
2 domains
Chain tRibosome biogenesis protein RLP7view chain
1 domain
Chain T60S ribosomal protein L21-Aview chain
1 domain
Chain uRibosome biogenesis protein RLP24view chain
1 domain
Chain U60S ribosomal protein L22-Aview chain
1 domain
Chain vRibosome biogenesis protein RPF2view chain
1 domain
Chain V60S ribosomal protein L23-Aview chain
1 domain
Chain wRegulator of ribosome biosynthesisview chain
1 domain
Chain WRibosome assembly factor MRT4view chain
2 domains
Chain xRibosome assembly protein 4view chain
1 domain
Chain X60S ribosomal protein L25view chain
1 domain
Chain yEukaryotic translation initiation factor 6view chain
1 domain
Chain Y60S ribosomal protein L26-Aview chain
1 domain
Chain Z60S ribosomal protein L27-Aview chain
1 domain

All Domains (56)

#ChainDomain IDRangeFamilyClassification
14e6m62414:15-109,4:129-260,4:298-326,4:463-465,4:500-558Peptidase_M24283 → 283.1 → 283.1.1
24e6m62424:327-328,4:349-394,4:416-441101.1.2.0101 → 101.1 → 101.1.2
3ae6m62a1a:57-149Ribosomal_L27A2490 → 2490.3 → 2490.3.1
4Ae6m62A1A:99-214Ribosomal_L2_C4 → 4.1 → 4.1.1
5Ae6m62A2A:2-98Ribosomal_L22 → 2.1 → 2.1.1
6be6m62b1b:165-347MMR_HSR1, NOG12004 → 2004.1 → 2004.1.1
7be6m62b2b:1-164NOG1_N601 → 601.30 → 601.30.1
8Be6m62B1B:2-387Ribosomal_L31 → 1.1 → 1.1.7
9ce6m62c1c:9-105Ribosomal_L7Ae301 → 301.1 → 301.1.1
10Ce6m62C1C:270-362Ribos_L4_asso_C3319 → 3319.1 → 3319.1.1
11Ce6m62C2C:2-269Ribosomal_L47559 → 7559.1 → 7559.1.1
12de6m62d1d:6-112Ribosomal_L31e259 → 259.1 → 259.1.1
13De6m62D1D:7-297Ribosomal_L18_c,Ribosomal_L5e2484 → 2484.1 → 2484.1.1
14ee6m62e1e:2-128Ribosomal_L32e2490 → 2490.1 → 2490.1.1
15Ee6m62E1E:2-109,E:129-176Ribosomal_L6e4 → 4.1 → 4.1.1
16fe6m62f1f:2-107Ribosomal_L35Ae1 → 1.1 → 1.1.7
17Fe6m62F1F:23-244Ribosomal_L30,Ribosomal_L30_N887 → 887.1 → 887.1.1
18ge6m62g1g:2-113Ribosomal_L34e377 → 377.12 → 377.12.1
19Ge6m62G1G:24-256Ribosomal_L7Ae301 → 301.1 → 301.1.1
20he6m62h1h:2-120Ribosomal_L29192 → 192.4 → 192.4.1
21He6m62H1H:1-85Ribosomal_L6318 → 318.1 → 318.1.1
22He6m62H2H:86-191Ribosomal_L6318 → 318.1 → 318.1.1
23ie6m62i1i:2-100Ribosomal_L36e3166 → 3166.1 → 3166.1.1
24Ie6m62I1I:1-131zf-C2H2_jaz386 → 386.1 → 386.1.1
25je6m62j1j:2-88Ribosomal_L37e375 → 375.1 → 375.1.1
26Je6m62J1J:6-174Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
27ke6m62k1k:2-78Ribosomal_L38e896 → 896.1 → 896.1.1
28Ke6m62K1K:106-233Ribosomal_L12007 → 2007.25 → 2007.25.1
29Ke6m62K2K:31-51,K:73-105,K:234-305898.1.1.0898 → 898.1 → 898.1.1
30le6m62l1l:2-51Ribosomal_L39585 → 585.1 → 585.1.1
31Le6m62L1L:8-194Ribosomal_L13e3210 → 3210.1 → 3210.1.1
32Me6m62M1M:2-138KOW,Ribosomal_L14e4 → 4.1 → 4.1.1
33Ne6m62N1N:2-204Ribosomal_L15e304 → 304.109 → 304.109.1
34Oe6m62O1O:3-199Ribosomal_L132490 → 2490.2 → 2490.2.1
35pe6m62p1p:2-92Ribosomal_L37ae375 → 375.1 → 375.1.1
36Pe6m62P1P:2-184Ribosomal_L22218 → 218.2 → 218.2.1
37Qe6m62Q1Q:15-148Ribosomal_L27A, Ribosomal_L182490 → 2490.3 → 2490.3.1
38Re6m62R1R:2-56Ribosomal_L19e637 → 637.1 → 637.1.1
39Re6m62R2R:57-157Ribosomal_L19e_C3050 → 3050.1 → 3050.1.1
40se6m62s1s:177-449MMR_HSR12004 → 2004.1 → 2004.1.1
41Se6m62S1S:2-693115.1.1.03115 → 3115.1 → 3115.1.1
42Se6m62S2S:70-172Ribosomal_L18A3115 → 3115.1 → 3115.1.1
43te6m62t1t:15-105,t:127-322Ribosomal_L30887 → 887.1 → 887.1.1
44Te6m62T1T:32-156Ribosomal_L21e4 → 4.1 → 4.1.1
45ue6m62u1u:1-63Ribosomal_L24e377 → 377.1 → 377.1.1
46Ue6m62U1U:9-114Ribosomal_L22e3715 → 3715.1 → 3715.1.1
47ve6m62v1v:9-253Brix7502 → 7502.1 → 7502.1.1
48Ve6m62V1V:2-137Ribosomal_L143174 → 3174.1 → 3174.1.1
49we6m62w1w:1-116RRS11017 → 1017.1 → 1017.1.1
50We6m62W1W:1-120,W:212-234Ribosomal_L10304 → 304.60 → 304.60.1
51We6m62W2W:121-211RL10P_insert3310 → 3310.1 → 3310.1.1
52xe6m62x1x:121-515WD40, eIF2A5 → 5.1 → 5.1.5
53Xe6m62X1X:2-142Ribosomal_L23,Ribosomal_L23eN304 → 304.109 → 304.109.1
54ye6m62y1y:1-244eIF-6232 → 232.1 → 232.1.1
55Ye6m62Y1Y:2-127KOW, Ribosomal_L264 → 4.1 → 4.1.1
56Ze6m62Z1Z:2-136Ribosomal_L27e4 → 4.1 → 4.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors