ECODEvolutionary Classification of Protein Domains

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PDB 6MG7

X-RAY DIFFRACTION2.90 Å4 chains7 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Gclade A/E 93TH057 HIV-1 gp120 coreview chain

2 domains

e6mg7G1(G:43-255,G:474-495)e6mg7G2(G:256-473)

Chain HCH54 Fab heavy chainview chain

2 domains

e6mg7H1(H:114-212)e6mg7H2(H:1-113)

Chain LCH54 Fab light chainview chain

2 domains

e6mg7L1(L:108-210)e6mg7L2(L:1-107)

Chain NM48U1 CD4 mimetic peptideview chain

1 domain

e6mg7N1(N:1-28)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	G	e6mg7G1	G:43-255,G:474-495	GP120	1061 → 1061.1 → 1061.1.1
2	G	e6mg7G2	G:256-473	GP120	259 → 259.1 → 259.1.1
3	H	e6mg7H1	H:114-212	C1-set	11 → 11.1 → 11.1.1
4	H	e6mg7H2	H:1-113	V-set	11 → 11.1 → 11.1.1
5	L	e6mg7L1	L:108-210	C1-set	11 → 11.1 → 11.1.1
6	L	e6mg7L2	L:1-107	V-set	11 → 11.1 → 11.1.1
7	N	e6mg7N1	N:1-28	387.1.5.0	387 → 387.1 → 387.1.5

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors