ECODEvolutionary Classification of Protein Domains

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PDB 6MY5

X-RAY DIFFRACTION1.73 Å4 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aanti-VEGF-A Fab fragment bH1 heavy chainview chain

2 domains

e6my5A1(A:114-214)e6my5A2(A:1-113)

Chain Banti-VEGF-A Fab fragment bH1 light chainview chain

2 domains

e6my5B1(B:1-107)e6my5B2(B:108-214)

Chain Hanti-VEGF-A Fab fragment bH1 heavy chainview chain

2 domains

e6my5H1(H:114-215)e6my5H2(H:1-113)

Chain Lanti-VEGF-A Fab fragment bH1 light chainview chain

2 domains

e6my5L1(L:108-214)e6my5L2(L:1-107)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6my5A1	A:114-214	C1-set	11 → 11.1 → 11.1.1
2	A	e6my5A2	A:1-113	V-set	11 → 11.1 → 11.1.1
3	B	e6my5B1	B:1-107	V-set	11 → 11.1 → 11.1.1
4	B	e6my5B2	B:108-214	C1-set	11 → 11.1 → 11.1.1
5	H	e6my5H1	H:114-215	C1-set	11 → 11.1 → 11.1.1
6	H	e6my5H2	H:1-113	V-set	11 → 11.1 → 11.1.1
7	L	e6my5L1	L:108-214	C1-set	11 → 11.1 → 11.1.1
8	L	e6my5L2	L:1-107	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors