ECODEvolutionary Classification of Protein Domains

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PDB 6MZL

ELECTRON MICROSCOPY22 chains24 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ATranscription initiation factor TFIID subunit 1view chain

3 domains

e6mzlA1(A:795-880)e6mzlA2(A:588-794,A:881-971,A:1054-1083)e6mzlA3(A:36-86)

Chain BTranscription initiation factor TFIID subunit 2view chain

3 domains

e6mzlB1(B:255-648)e6mzlB2(B:649-987)e6mzlB3(B:20-254)

Chain CTranscription initiation factor TFIID subunit 3view chain

1 domain

e6mzlC1(C:28-99)

Chain FTranscription initiation factor TFIID subunit 5,TAF5view chain

2 domains

e6mzlF1(F:202-343)e6mzlF2(F:539-739)

Chain GTranscription initiation factor TFIID subunit 5,TAF5view chain

2 domains

e6mzlG1(G:202-343)e6mzlG2(G:539-739)

Chain HTranscription initiation factor TFIID subunit 6view chain

2 domains

e6mzlH1(H:217-473)e6mzlH2(H:6-77)

Chain ITranscription initiation factor TFIID subunit 6view chain

2 domains

e6mzlI1(I:207-473)e6mzlI2(I:6-77)

Chain JTranscription initiation factor TFIID subunit 7view chain

1 domain

e6mzlJ1(J:11-106,J:128-154)

Chain NTranscription initiation factor TFIID subunit 10view chain

1 domain

e6mzlN1(N:113-208)

Chain OTranscription initiation factor TFIID subunit 10view chain

1 domain

e6mzlO1(O:113-208)

Chain PTranscription initiation factor TFIID subunit 11view chain

1 domain

e6mzlP1(P:113-201)

Chain QTranscription initiation factor TFIID subunit 12view chain

1 domain

e6mzlQ1(Q:55-128)

Chain RTranscription initiation factor TFIID subunit 12view chain

1 domain

e6mzlR1(R:55-128)

Chain STranscription initiation factor TFIID subunit 13view chain

1 domain

e6mzlS1(S:31-75)

Chain TTATA-box-binding proteinview chain

2 domains

e6mzlT1(T:159-256)e6mzlT2(T:257-338)

All Domains (24)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6mzlA1	A:795-880	DUF3591	101 → 101.1 → 101.1.2
2	A	e6mzlA2	A:588-794,A:881-971,A:1054-1083	DUF3591	59 → 59.1 → 59.1.4
3	A	e6mzlA3	A:36-86	TBP-binding	575 → 575.1 → 575.1.1
4	B	e6mzlB1	B:255-648	TAF2_3rd	2498 → 2498.1 → 2498.1.1
5	B	e6mzlB2	B:649-987	TPR_TAF2_C	109 → 109.4 → 109.4.1
6	B	e6mzlB3	B:20-254	4081.1.1.0	4081 → 4081.1 → 4081.1.1
7	C	e6mzlC1	C:28-99	Bromo_TP	148 → 148.1 → 148.1.1
8	F	e6mzlF1	F:202-343	TFIID_NTD2	4320 → 4320.1 → 4320.1.1
9	F	e6mzlF2	F:539-739	WD40	5 → 5.1 → 5.1.4
10	G	e6mzlG1	G:202-343	TFIID_NTD2	4320 → 4320.1 → 4320.1.1
11	G	e6mzlG2	G:539-739	WD40	5 → 5.1 → 5.1.4
12	H	e6mzlH1	H:217-473	TAF6_C	109 → 109.4 → 109.4.1
13	H	e6mzlH2	H:6-77	TAF	148 → 148.1 → 148.1.1
14	I	e6mzlI1	I:207-473	TAF6_C	109 → 109.4 → 109.4.1
15	I	e6mzlI2	I:6-77	TAF	148 → 148.1 → 148.1.1
16	J	e6mzlJ1	J:11-106,J:128-154	TAFII55_N	59 → 59.1 → 59.1.4
17	N	e6mzlN1	N:113-208	TFIID_30kDa	148 → 148.1 → 148.1.1
18	O	e6mzlO1	O:113-208	TFIID_30kDa	148 → 148.1 → 148.1.1
19	P	e6mzlP1	P:113-201	TAFII28	148 → 148.1 → 148.1.1
20	Q	e6mzlQ1	Q:55-128	TFIID_20kDa	148 → 148.1 → 148.1.1
21	R	e6mzlR1	R:55-128	TFIID_20kDa	148 → 148.1 → 148.1.1
22	S	e6mzlS1	S:31-75	TFIID-18kDa	148 → 148.1 → 148.1.1
23	T	e6mzlT1	T:159-256	TBP	331 → 331.1 → 331.1.1
24	T	e6mzlT2	T:257-338	TBP	331 → 331.1 → 331.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors