ECODEvolutionary Classification of Protein Domains

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PDB 6N3J

ELECTRON CRYSTALLOGRAPHY3.00 Å6 chains6 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ACTD-SP1 fragment of HIV-1 Gagview chain

1 domain

e6n3jA1(A:280-370)

Chain BCTD-SP1 fragment of HIV-1 Gagview chain

1 domain

e6n3jB1(B:280-370)

Chain CCTD-SP1 fragment of HIV-1 Gagview chain

1 domain

e6n3jC1(C:280-370)

Chain DCTD-SP1 fragment of HIV-1 Gagview chain

1 domain

e6n3jD1(D:281-370)

Chain ECTD-SP1 fragment of HIV-1 Gagview chain

1 domain

e6n3jE1(E:280-370)

Chain FCTD-SP1 fragment of HIV-1 Gagview chain

1 domain

e6n3jF1(F:280-370)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6n3jA1	A:280-370	Gag_p24_C	170 → 170.1 → 170.1.1
2	B	e6n3jB1	B:280-370	Gag_p24_C	170 → 170.1 → 170.1.1
3	C	e6n3jC1	C:280-370	Gag_p24_C	170 → 170.1 → 170.1.1
4	D	e6n3jD1	D:281-370	Gag_p24_C	170 → 170.1 → 170.1.1
5	E	e6n3jE1	E:280-370	Gag_p24_C	170 → 170.1 → 170.1.1
6	F	e6n3jF1	F:280-370	Gag_p24_C	170 → 170.1 → 170.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors