ECODEvolutionary Classification of Protein Domains

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PDB 6N7P

ELECTRON MICROSCOPY21 chains16 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain CU1 small nuclear ribonucleoprotein Aview chain

2 domains

e6n7pC01(C:57-148)e6n7pC02(C:222-298)

Chain DU1 small nuclear ribonucleoprotein component PRP42view chain

1 domain

e6n7pD1(D:1-544)

Chain FProtein NAM8view chain

3 domains

e6n7pF1(F:56-156)e6n7pF2(F:157-244)e6n7pF3(F:245-265,F:298-384)

Chain KSmall nuclear ribonucleoprotein-associated protein Bview chain

1 domain

e6n7pK1(K:8-53,K:77-103)

Chain LSmall nuclear ribonucleoprotein Sm D1view chain

1 domain

e6n7pL1(L:1-119)

Chain MSmall nuclear ribonucleoprotein Sm D2view chain

1 domain

e6n7pM1(M:2-108)

Chain NSmall nuclear ribonucleoprotein Sm D3view chain

1 domain

e6n7pN1(N:2-94)

Chain OSmall nuclear ribonucleoprotein Eview chain

1 domain

e6n7pO1(O:9-92)

Chain PSmall nuclear ribonucleoprotein Fview chain

1 domain

e6n7pP1(P:12-85)

Chain QSmall nuclear ribonucleoprotein Gview chain

1 domain

e6n7pQ1(Q:2-77)

Chain XNuclear cap-binding protein complex subunit 1view chain

2 domains

e6n7pX01(X:389-565)e6n7pX02(X:566-768)

Chain YNuclear cap-binding protein subunit 2view chain

1 domain

e6n7pY1(Y:19-156)

All Domains (16)

#	Chain	Domain ID	Range	Family	Classification
1	C	e6n7pC01	C:57-148	304.9.1.0	304 → 304.9 → 304.9.1
2	C	e6n7pC02	C:222-298	RRM_1	304 → 304.9 → 304.9.1
3	D	e6n7pD1	D:1-544	HAT_PRP39_N, HAT_PRP39_C	109 → 109.4 → 109.4.1
4	F	e6n7pF1	F:56-156	304.9.1.0	304 → 304.9 → 304.9.1
5	F	e6n7pF2	F:157-244	RRM_1	304 → 304.9 → 304.9.1
6	F	e6n7pF3	F:245-265,F:298-384	RRM_1	304 → 304.9 → 304.9.1
7	K	e6n7pK1	K:8-53,K:77-103	LSM	4 → 4.1 → 4.1.1
8	L	e6n7pL1	L:1-119	LSM	4 → 4.1 → 4.1.1
9	M	e6n7pM1	M:2-108	LSM	4 → 4.1 → 4.1.1
10	N	e6n7pN1	N:2-94	LSM	4 → 4.1 → 4.1.1
11	O	e6n7pO1	O:9-92	LSM	4 → 4.1 → 4.1.1
12	P	e6n7pP1	P:12-85	LSM	4 → 4.1 → 4.1.1
13	Q	e6n7pQ1	Q:2-77	LSM	4 → 4.1 → 4.1.1
14	X	e6n7pX01	X:389-565	MIF4G_like	109 → 109.4 → 109.4.1
15	X	e6n7pX02	X:566-768	MIF4G_like_2	109 → 109.4 → 109.4.1
16	Y	e6n7pY1	Y:19-156	RRM_1	304 → 304.9 → 304.9.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors