ECODEvolutionary Classification of Protein Domains

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PDB 6OMG

X-RAY DIFFRACTION2.10 Å4 chains7 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AAntigen-presenting glycoprotein CD1d1view chain

2 domains

e6omgA1(A:6-179)e6omgA2(A:180-279)

Chain BBeta-2-microglobulinview chain

1 domain

e6omgB1(B:3-99)

Chain CCHIMERIC T CELL ANTIGEN RECEPTOR ALPHA CHAIN VA14,VA24view chain

2 domains

e6omgC1(C:116-204)e6omgC2(C:1-115)

Chain DCHIMERIC T CELL ANTIGEN RECEPTOR BETA CHAIN VB8.2, VB11view chain

2 domains

e6omgD1(D:2-115)e6omgD2(D:116-240)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6omgA1	A:6-179	MHC_I_3	233 → 233.1 → 233.1.1
2	A	e6omgA2	A:180-279	C1-set	11 → 11.1 → 11.1.1
3	B	e6omgB1	B:3-99	C1-set	11 → 11.1 → 11.1.1
4	C	e6omgC1	C:116-204	DUF1968	11 → 11.1 → 11.1.1
5	C	e6omgC2	C:1-115	V-set	11 → 11.1 → 11.1.1
6	D	e6omgD1	D:2-115	V-set	11 → 11.1 → 11.1.1
7	D	e6omgD2	D:116-240	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors