ECODEvolutionary Classification of Protein Domains

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PDB 6ORN

ELECTRON MICROSCOPY12 chains18 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain A10-1074 antibody Fab heavy chainview chain

1 domain

e6ornA1(A:1-133)

Chain B10-1074 antibody Fab light chainview chain

1 domain

e6ornB1(B:8-108)

Chain CRC1 variant of HIV-1 Env glycoprotein gp41view chain

1 domain

e6ornC1(C:518-546,C:572-664)

Chain F10-1074 antibody Fab heavy chainview chain

1 domain

e6ornF1(F:1-114)

Chain GRC1 variant of HIV-1 Env glycoprotein gp120view chain

3 domains

e6ornG1(G:256-473)e6ornG2(G:31-119,G:203-255,G:474-505)e6ornG3(G:120-202)

Chain I10-1074 antibody Fab light chainview chain

1 domain

e6ornI1(I:8-108)

Chain JRC1 variant of HIV-1 Env glycoprotein gp41view chain

1 domain

e6ornJ1(J:518-546,J:572-664)

Chain KRC1 variant of HIV-1 Env glycoprotein gp120view chain

3 domains

e6ornK1(K:256-473)e6ornK2(K:31-119,K:203-255,K:474-505)e6ornK3(K:120-202)

Chain O10-1074 antibody Fab heavy chainview chain

1 domain

e6ornO1(O:1-114)

Chain P10-1074 antibody Fab light chainview chain

1 domain

e6ornP1(P:8-108)

Chain QRC1 variant of HIV-1 Env glycoprotein gp41view chain

1 domain

e6ornQ1(Q:518-546,Q:572-664)

Chain RRC1 variant of HIV-1 Env glycoprotein gp120view chain

3 domains

e6ornR1(R:256-473)e6ornR2(R:120-202)e6ornR3(R:31-119,R:203-255,R:474-505)

All Domains (18)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6ornA1	A:1-133	V-set	11 → 11.1 → 11.1.1
2	B	e6ornB1	B:8-108	V-set	11 → 11.1 → 11.1.1
3	C	e6ornC1	C:518-546,C:572-664	GP41	3567 → 3567.1 → 3567.1.1
4	F	e6ornF1	F:1-114	V-set	11 → 11.1 → 11.1.1
5	G	e6ornG1	G:256-473	GP120	259 → 259.1 → 259.1.1
6	G	e6ornG2	G:31-119,G:203-255,G:474-505	GP120	1061 → 1061.1 → 1061.1.1
7	G	e6ornG3	G:120-202	GP120	6173 → 6173.1 → 6173.1.1
8	I	e6ornI1	I:8-108	V-set	11 → 11.1 → 11.1.1
9	J	e6ornJ1	J:518-546,J:572-664	GP41	3567 → 3567.1 → 3567.1.1
10	K	e6ornK1	K:256-473	GP120	259 → 259.1 → 259.1.1
11	K	e6ornK2	K:31-119,K:203-255,K:474-505	GP120	1061 → 1061.1 → 1061.1.1
12	K	e6ornK3	K:120-202	GP120	6173 → 6173.1 → 6173.1.1
13	O	e6ornO1	O:1-114	V-set	11 → 11.1 → 11.1.1
14	P	e6ornP1	P:8-108	V-set	11 → 11.1 → 11.1.1
15	Q	e6ornQ1	Q:518-546,Q:572-664	GP41	3567 → 3567.1 → 3567.1.1
16	R	e6ornR1	R:256-473	GP120	259 → 259.1 → 259.1.1
17	R	e6ornR2	R:120-202	GP120	6173 → 6173.1 → 6173.1.1
18	R	e6ornR3	R:31-119,R:203-255,R:474-505	GP120	1061 → 1061.1 → 1061.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors