ECODEvolutionary Classification of Protein Domains

Home/PDB

PDB 6PPO

ELECTRON MICROSCOPY5 chains5 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain ACapsid protein VP1view chain

1 domain

e6ppoA1(A:19-279)

Chain BCapsid protein VP3view chain

1 domain

e6ppoB1(B:1-235)

Chain CCapsid protein VP2view chain

1 domain

e6ppoC1(C:13-265)

Chain DCapsid protein VP4view chain

1 domain

e6ppoD1(D:28-57)

Chain UCadherin-related family member 3view chain

1 domain

e6ppoU1(U:20-127)

All Domains (5)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6ppoA1	A:19-279	Rhv_5	10 → 10.2 → 10.2.1
2	B	e6ppoB1	B:1-235	Rhv	10 → 10.2 → 10.2.1
3	C	e6ppoC1	C:13-265	Rhv	10 → 10.2 → 10.2.1
4	D	e6ppoD1	D:28-57	Pico_P1A	10 → 10.2 → 10.2.1
5	U	e6ppoU1	U:20-127	CDHR3_N	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors