ECODEvolutionary Classification of Protein Domains

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PDB 6PVK

ELECTRON MICROSCOPY17 chains17 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain b50S ribosomal protein L32view chain

1 domain

e6pvkb1(b:4-55)

Chain C50S ribosomal protein L2view chain

2 domains

e6pvkC1(C:2-126)e6pvkC2(C:127-221)

Chain d50S ribosomal protein L34view chain

1 domain

e6pvkd1(d:5-43)

Chain D50S ribosomal protein L3view chain

1 domain

e6pvkD1(D:3-121,D:160-207)

Chain E50S ribosomal protein L4view chain

1 domain

e6pvkE1(E:2-206)

Chain J50S ribosomal protein L13view chain

1 domain

e6pvkJ1(J:4-144)

Chain K50S ribosomal protein L14view chain

1 domain

e6pvkK1(K:2-121)

Chain L50S ribosomal protein L15view chain

1 domain

e6pvkL1(L:3-35,L:68-139)

Chain N50S ribosomal protein L17view chain

1 domain

e6pvkN1(N:2-120)

Chain P50S ribosomal protein L19view chain

1 domain

e6pvkP1(P:5-107)

Chain Q50S ribosomal protein L20view chain

1 domain

e6pvkQ1(Q:2-117)

Chain R50S ribosomal protein L21view chain

1 domain

e6pvkR1(R:2-101)

Chain S50S ribosomal protein L22view chain

1 domain

e6pvkS1(S:2-110)

Chain T50S ribosomal protein L23view chain

1 domain

e6pvkT1(T:3-91)

Chain U50S ribosomal protein L24view chain

1 domain

e6pvkU1(U:2-101)

Chain Y50S ribosomal protein L29view chain

1 domain

e6pvkY1(Y:1-63)

All Domains (17)

#	Chain	Domain ID	Range	Family	Classification
1	b	e6pvkb1	b:4-55	Ribosomal_L32p	375 → 375.1 → 375.1.1
2	C	e6pvkC1	C:2-126	Ribosomal_L2	2 → 2.1 → 2.1.1
3	C	e6pvkC2	C:127-221	Ribosomal_L2_C	4 → 4.1 → 4.1.1
4	d	e6pvkd1	d:5-43	Ribosomal_L34	3074 → 3074.1 → 3074.1.1
5	D	e6pvkD1	D:3-121,D:160-207	1.1.7.0	1 → 1.1 → 1.1.7
6	E	e6pvkE1	E:2-206	Ribosomal_L4	7559 → 7559.1 → 7559.1.1
7	J	e6pvkJ1	J:4-144	Ribosomal_L13	2490 → 2490.2 → 2490.2.1
8	K	e6pvkK1	K:2-121	Ribosomal_L14	3174 → 3174.1 → 3174.1.1
9	L	e6pvkL1	L:3-35,L:68-139	Ribosomal_L27A	2490 → 2490.3 → 2490.3.1
10	N	e6pvkN1	N:2-120	Ribosomal_L17	218 → 218.3 → 218.3.1
11	P	e6pvkP1	P:5-107	Ribosomal_L19	4 → 4.1 → 4.1.1
12	Q	e6pvkQ1	Q:2-117	Ribosomal_L20	143 → 143.2 → 143.2.1
13	R	e6pvkR1	R:2-101	Ribosomal_L21p	4186 → 4186.1 → 4186.1.1
14	S	e6pvkS1	S:2-110	Ribosomal_L22	218 → 218.2 → 218.2.1
15	T	e6pvkT1	T:3-91	Ribosomal_L23	304 → 304.109 → 304.109.1
16	U	e6pvkU1	U:2-101	KOW,ribosomal_L24	4 → 4.1 → 4.1.1
17	Y	e6pvkY1	Y:1-63	Ribosomal_L29	192 → 192.4 → 192.4.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors