ECODEvolutionary Classification of Protein Domains

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PDB 6QLD

ELECTRON MICROSCOPY22 chains11 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain aHistone H3-like centromeric protein CSE4view chain

1 domain

e6qlda1(a:137-226)

Chain bHistone H4view chain

1 domain

e6qldb1(b:25-103)

Chain dHistone H2B.2view chain

1 domain

e6qldd1(d:37-129)

Chain eHistone H3-like centromeric protein CSE4view chain

1 domain

e6qlde1(e:138-226)

Chain fHistone H4view chain

1 domain

e6qldf1(f:25-103)

Chain gHistone H2A.1view chain

1 domain

e6qldg1(g:17-121)

Chain hHistone H2B.1view chain

1 domain

e6qldh1(h:36-129)

Chain iHistone H2A.1view chain

1 domain

e6qldi1(i:17-118)

Chain LInner kinetochore subunit IML3view chain

1 domain

e6qldL1(L:2-242)

Chain OInner kinetochore subunit MCM21view chain

2 domains

e6qldO1(O:153-276)e6qldO2(O:277-364)

All Domains (11)

#	Chain	Domain ID	Range	Family	Classification
1	a	e6qlda1	a:137-226	Histone	148 → 148.1 → 148.1.1
2	b	e6qldb1	b:25-103	CENP-T_C	148 → 148.1 → 148.1.1
3	d	e6qldd1	d:37-129	Histone	148 → 148.1 → 148.1.1
4	e	e6qlde1	e:138-226	Histone	148 → 148.1 → 148.1.1
5	f	e6qldf1	f:25-103	CENP-T_C	148 → 148.1 → 148.1.1
6	g	e6qldg1	g:17-121	Histone,Histone_H2A_C	148 → 148.1 → 148.1.1
7	h	e6qldh1	h:36-129	Histone	148 → 148.1 → 148.1.1
8	i	e6qldi1	i:17-118	Histone,Histone_H2A_C	148 → 148.1 → 148.1.1
9	L	e6qldL1	L:2-242	IML3	3435 → 3435.1 → 3435.1.1
10	O	e6qldO1	O:153-276	CENP-O	4099 → 4099.1 → 4099.1.1
11	O	e6qldO2	O:277-364	4099.1.1.0	4099 → 4099.1 → 4099.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors