ECODEvolutionary Classification of Protein Domains

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PDB 6QML

X-RAY DIFFRACTION2.00 Å6 chains6 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AUbiquitin carboxyl-terminal hydrolase isozyme L3view chain

1 domain

e6qmlA1(A:4-230)

Chain BPolyubiquitin-Bview chain

1 domain

e6qmlB1(B:1-76)

Chain CPolyubiquitin-Cview chain

1 domain

e6qmlC1(C:1-76)

Chain DUbiquitin carboxyl-terminal hydrolase isozyme L3view chain

1 domain

e6qmlD1(D:4-230)

Chain EPolyubiquitin-Bview chain

1 domain

e6qmlE1(E:1-76)

Chain FPolyubiquitin-Cview chain

1 domain

e6qmlF1(F:1-76)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6qmlA1	A:4-230	Peptidase_C12	219 → 219.1 → 219.1.1
2	B	e6qmlB1	B:1-76	ubiquitin	221 → 221.1 → 221.1.1
3	C	e6qmlC1	C:1-76	ubiquitin	221 → 221.1 → 221.1.1
4	D	e6qmlD1	D:4-230	Peptidase_C12	219 → 219.1 → 219.1.1
5	E	e6qmlE1	E:1-76	ubiquitin	221 → 221.1 → 221.1.1
6	F	e6qmlF1	F:1-76	ubiquitin	221 → 221.1 → 221.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors