ECODEvolutionary Classification of Protein Domains

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PDB 6QPH

X-RAY DIFFRACTION3.40 Å11 chains13 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 1Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e6qph11(1:32-226)

Chain 2Lhc2view chain

1 domain

e6qph21(2:62-272)

Chain 3Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e6qph31(3:73-282)

Chain 4Lhc4view chain

1 domain

e6qph41(4:123-333)

Chain APhotosystem I P700 chlorophyll a apoprotein A1view chain

2 domains

e6qphA1(A:415-751)e6qphA2(A:13-414)

Chain BPhotosystem I P700 chlorophyll a apoprotein A2view chain

2 domains

e6qphB1(B:2-405)e6qphB2(B:406-735)

Chain CPhotosystem I iron-sulfur centerview chain

1 domain

e6qphC1(C:2-81)

Chain DPsaDview chain

1 domain

e6qphD1(D:71-212)

Chain EPsaEview chain

1 domain

e6qphE1(E:65-128)

Chain FPsaFview chain

1 domain

e6qphF1(F:78-240)

Chain JPhotosystem I reaction center subunit IXview chain

1 domain

e6qphJ1(J:1-41)

All Domains (13)

#	Chain	Domain ID	Range	Family	Classification
1	1	e6qph11	1:32-226	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
2	2	e6qph21	2:62-272	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
3	3	e6qph31	3:73-282	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
4	4	e6qph41	4:123-333	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
5	A	e6qphA1	A:415-751	PsaA_PsaB	5037 → 5037.1 → 5037.1.1
6	A	e6qphA2	A:13-414	PsaA_PsaB	5075 → 5075.1 → 5075.1.1
7	B	e6qphB1	B:2-405	PsaA_PsaB	5075 → 5075.1 → 5075.1.1
8	B	e6qphB2	B:406-735	PsaA_PsaB	5037 → 5037.1 → 5037.1.1
9	C	e6qphC1	C:2-81	Fer4+Fer4_7	205 → 205.1 → 205.1.1
10	D	e6qphD1	D:71-212	PsaD	834 → 834.1 → 834.1.1
11	E	e6qphE1	E:65-128	PSI_PsaE	4 → 4.1 → 4.1.1
12	F	e6qphF1	F:78-240	PSI_PsaF	5019 → 5019.1 → 5019.1.1
13	J	e6qphJ1	J:1-41	PSI_PsaJ	5021 → 5021.1 → 5021.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors