ECODEvolutionary Classification of Protein Domains

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PDB 6SEE

ELECTRON MICROSCOPY11 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AHistone H3-like centromeric protein Aview chain

1 domain

e6seeA1(A:42-139)

Chain BHistone H4view chain

1 domain

e6seeB1(B:23-102)

Chain CHistone H2A type 2-Aview chain

1 domain

e6seeC1(C:16-110)

Chain DHistone H2B type 1-C/E/F/G/Iview chain

1 domain

e6seeD1(D:30-121)

Chain EHistone H3-like centromeric protein Aview chain

1 domain

e6seeE1(E:42-139)

Chain FHistone H4view chain

1 domain

e6seeF1(F:25-102)

Chain GHistone H2A type 2-Aview chain

1 domain

e6seeG1(G:11-117)

Chain HHistone H2B type 1-C/E/F/G/Iview chain

1 domain

e6seeH1(H:35-124)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6seeA1	A:42-139	Histone	148 → 148.1 → 148.1.1
2	B	e6seeB1	B:23-102	CENP-T_C	148 → 148.1 → 148.1.1
3	C	e6seeC1	C:16-110	Histone,Histone_H2A_C	148 → 148.1 → 148.1.1
4	D	e6seeD1	D:30-121	Histone	148 → 148.1 → 148.1.1
5	E	e6seeE1	E:42-139	Histone	148 → 148.1 → 148.1.1
6	F	e6seeF1	F:25-102	CENP-T_C	148 → 148.1 → 148.1.1
7	G	e6seeG1	G:11-117	Histone,Histone_H2A_C	148 → 148.1 → 148.1.1
8	H	e6seeH1	H:35-124	Histone	148 → 148.1 → 148.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors