ECODEvolutionary Classification of Protein Domains

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PDB 6SNW

ELECTRON MICROSCOPY5 chains7 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ACapsid protein VP1view chain

1 domain

e6snwA1(A:2-297)

Chain BCoxsackievirus VP2view chain

1 domain

e6snwB1(B:10-255)

Chain CCapsid protein VP3view chain

1 domain

e6snwC1(C:1-240)

Chain DCoxsackievirus VP4view chain

1 domain

e6snwD1(D:28-68)

Chain EKremen protein 1view chain

3 domains

e6snwE1(E:29-116)e6snwE2(E:117-211)e6snwE3(E:212-322)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6snwA1	A:2-297	Rhv_5	10 → 10.2 → 10.2.1
2	B	e6snwB1	B:10-255	Rhv	10 → 10.2 → 10.2.1
3	C	e6snwC1	C:1-240	Rhv	10 → 10.2 → 10.2.1
4	D	e6snwD1	D:28-68	Pico_P1A	10 → 10.2 → 10.2.1
5	E	e6snwE1	E:29-116	Kringle	380 → 380.1 → 380.1.1
6	E	e6snwE2	E:117-211	WSC	390 → 390.1 → 390.1.1
7	E	e6snwE3	E:212-322	CUB	10 → 10.4 → 10.4.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors