ECODEvolutionary Classification of Protein Domains

Home/PDB

PDB 6SQR

X-RAY DIFFRACTION2.18 Å12 chains12 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain AE3 ubiquitin-protein ligase Mdm2view chain

1 domain

e6sqrA1(A:423-491)

Chain BUbiquitin-conjugating enzyme E2 D2view chain

1 domain

e6sqrB1(B:2-147)

Chain CUbiquitin-40S ribosomal protein S27aview chain

1 domain

e6sqrC1(C:0-76)

Chain DE3 ubiquitin-protein ligase Mdm2view chain

1 domain

e6sqrD1(D:428-491)

Chain EUbiquitin-conjugating enzyme E2 D2view chain

1 domain

e6sqrE1(E:2-147)

Chain FUbiquitin-40S ribosomal protein S27aview chain

1 domain

e6sqrF1(F:0-76)

Chain GE3 ubiquitin-protein ligase Mdm2view chain

1 domain

e6sqrG1(G:429-491)

Chain HUbiquitin-conjugating enzyme E2 D2view chain

1 domain

e6sqrH1(H:2-147)

Chain IPolyubiquitin-Cview chain

1 domain

e6sqrI1(I:1-76)

Chain JE3 ubiquitin-protein ligase Mdm2view chain

1 domain

e6sqrJ1(J:428-491)

Chain KUbiquitin-conjugating enzyme E2 D2view chain

1 domain

e6sqrK1(K:2-147)

Chain LUbiquitin-40S ribosomal protein S27aview chain

1 domain

e6sqrL1(L:0-76)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6sqrA1	A:423-491	zf-C3HC4_3	376 → 376.1 → 376.1.1
2	B	e6sqrB1	B:2-147	UQ_con	216 → 216.1 → 216.1.1
3	C	e6sqrC1	C:0-76	ubiquitin	221 → 221.1 → 221.1.1
4	D	e6sqrD1	D:428-491	zf-C3HC4_3	376 → 376.1 → 376.1.1
5	E	e6sqrE1	E:2-147	UQ_con	216 → 216.1 → 216.1.1
6	F	e6sqrF1	F:0-76	ubiquitin	221 → 221.1 → 221.1.1
7	G	e6sqrG1	G:429-491	zf-C3HC4_3	376 → 376.1 → 376.1.1
8	H	e6sqrH1	H:2-147	UQ_con	216 → 216.1 → 216.1.1
9	I	e6sqrI1	I:1-76	ubiquitin	221 → 221.1 → 221.1.1
10	J	e6sqrJ1	J:428-491	zf-C3HC4_3	376 → 376.1 → 376.1.1
11	K	e6sqrK1	K:2-147	UQ_con	216 → 216.1 → 216.1.1
12	L	e6sqrL1	L:0-76	ubiquitin	221 → 221.1 → 221.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors