ECODEvolutionary Classification of Protein Domains

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PDB 6UPU

X-RAY DIFFRACTION2.20 Å16 chains16 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AULP_PROTEASE domain-containing proteinview chain

1 domain

e6upuA1(A:52-193)

Chain BUbiquitinview chain

1 domain

e6upuB1(B:0-76)

Chain CUbiquitinview chain

1 domain

e6upuC1(C:1-76)

Chain DUbiquitinview chain

1 domain

e6upuD1(D:1-76)

Chain EULP_PROTEASE domain-containing proteinview chain

1 domain

e6upuE1(E:52-193)

Chain FUbiquitinview chain

1 domain

e6upuF1(F:0-76)

Chain GUbiquitinview chain

1 domain

e6upuG1(G:1-75)

Chain HUbiquitinview chain

1 domain

e6upuH1(H:0-75)

Chain IULP_PROTEASE domain-containing proteinview chain

1 domain

e6upuI1(I:52-193)

Chain JUbiquitinview chain

1 domain

e6upuJ1(J:0-76)

Chain KUbiquitinview chain

1 domain

e6upuK1(K:0-74)

Chain LUbiquitinview chain

1 domain

e6upuL1(L:1-76)

Chain MULP_PROTEASE domain-containing proteinview chain

1 domain

e6upuM1(M:52-193)

Chain NUbiquitinview chain

1 domain

e6upuN1(N:-1-76)

Chain OUbiquitinview chain

1 domain

e6upuO1(O:1-75)

Chain PUbiquitinview chain

1 domain

e6upuP1(P:0-76)

All Domains (16)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6upuA1	A:52-193	RickCE_cat	219 → 219.1 → 219.1.1
2	B	e6upuB1	B:0-76	ubiquitin	221 → 221.1 → 221.1.1
3	C	e6upuC1	C:1-76	ubiquitin	221 → 221.1 → 221.1.1
4	D	e6upuD1	D:1-76	ubiquitin	221 → 221.1 → 221.1.1
5	E	e6upuE1	E:52-193	RickCE_cat	219 → 219.1 → 219.1.1
6	F	e6upuF1	F:0-76	ubiquitin	221 → 221.1 → 221.1.1
7	G	e6upuG1	G:1-75	ubiquitin	221 → 221.1 → 221.1.1
8	H	e6upuH1	H:0-75	ubiquitin	221 → 221.1 → 221.1.1
9	I	e6upuI1	I:52-193	RickCE_cat	219 → 219.1 → 219.1.1
10	J	e6upuJ1	J:0-76	ubiquitin	221 → 221.1 → 221.1.1
11	K	e6upuK1	K:0-74	ubiquitin	221 → 221.1 → 221.1.1
12	L	e6upuL1	L:1-76	ubiquitin	221 → 221.1 → 221.1.1
13	M	e6upuM1	M:52-193	RickCE_cat	219 → 219.1 → 219.1.1
14	N	e6upuN1	N:-1-76	ubiquitin	221 → 221.1 → 221.1.1
15	O	e6upuO1	O:1-75	ubiquitin	221 → 221.1 → 221.1.1
16	P	e6upuP1	P:0-76	ubiquitin	221 → 221.1 → 221.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors