ECODEvolutionary Classification of Protein Domains

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PDB 6V4X

ELECTRON MICROSCOPY12 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ASmall nuclear ribonucleoprotein Sm D3view chain

1 domain

e6v4xA1(A:2-84)

Chain BSmall nuclear ribonucleoprotein-associated proteins B and B'view chain

1 domain

e6v4xB1(B:2-87)

Chain CU7 snRNA-associated Sm-like protein LSm10view chain

1 domain

e6v4xC1(C:1-114)

Chain DU7 snRNA-associated Sm-like protein LSm11view chain

1 domain

e6v4xD1(D:107-118,D:139-359)

Chain ESmall nuclear ribonucleoprotein Eview chain

1 domain

e6v4xE1(E:10-90)

Chain FSmall nuclear ribonucleoprotein Fview chain

1 domain

e6v4xF1(F:3-76)

Chain GSmall nuclear ribonucleoprotein Gview chain

1 domain

e6v4xG1(G:4-80)

Chain HCleavage and polyadenylation specificity factor subunit 3view chain

2 domains

e6v4xH1(H:211-393)e6v4xH2(H:9-210,H:394-512)

Chain ICleavage and polyadenylation specificity factor subunit 2view chain

2 domains

e6v4xI1(I:207-386,I:519-540)e6v4xI2(I:2-206,I:541-637,I:697-702)

Chain JSymplekinview chain

1 domain

e6v4xJ1(J:30-340)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6v4xA1	A:2-84	LSM	4 → 4.1 → 4.1.1
2	B	e6v4xB1	B:2-87	LSM	4 → 4.1 → 4.1.1
3	C	e6v4xC1	C:1-114	LSM	4 → 4.1 → 4.1.1
4	D	e6v4xD1	D:107-118,D:139-359	LSM	4 → 4.1 → 4.1.1
5	E	e6v4xE1	E:10-90	LSM	4 → 4.1 → 4.1.1
6	F	e6v4xF1	F:3-76	LSM	4 → 4.1 → 4.1.1
7	G	e6v4xG1	G:4-80	LSM	4 → 4.1 → 4.1.1
8	H	e6v4xH1	H:211-393	Beta-Casp	2004 → 2004.1 → 2004.1.1
9	H	e6v4xH2	H:9-210,H:394-512	247.1.1.0	247 → 247.1 → 247.1.1
10	I	e6v4xI1	I:207-386,I:519-540	Beta-Casp	2004 → 2004.1 → 2004.1.1
11	I	e6v4xI2	I:2-206,I:541-637,I:697-702	RMMBL,Lactamase_B_6	247 → 247.1 → 247.1.1
12	J	e6v4xJ1	J:30-340	SYMPK_PTA1_N	109 → 109.4 → 109.4.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors