ECODEvolutionary Classification of Protein Domains

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PDB 6VFS

ELECTRON MICROSCOPY21 chains26 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AATP-dependent Clp protease ATP-binding subunit ClpXview chain

2 domains

e6vfsA1(A:316-412)e6vfsA2(A:63-315)

Chain BATP-dependent Clp protease ATP-binding subunit ClpXview chain

2 domains

e6vfsB1(B:316-412)e6vfsB2(B:63-315)

Chain CATP-dependent Clp protease ATP-binding subunit ClpXview chain

2 domains

e6vfsC1(C:316-412)e6vfsC2(C:63-315)

Chain DATP-dependent Clp protease ATP-binding subunit ClpXview chain

2 domains

e6vfsD1(D:63-315)e6vfsD2(D:316-412)

Chain EATP-dependent Clp protease ATP-binding subunit ClpXview chain

2 domains

e6vfsE1(E:63-315)e6vfsE2(E:316-412)

Chain FATP-dependent Clp protease ATP-binding subunit ClpXview chain

2 domains

e6vfsF1(F:311-412)e6vfsF2(F:63-251,F:289-310)

Chain HATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfsH1(H:6-198)

Chain IATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfsI1(I:6-198)

Chain JATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfsJ1(J:6-198)

Chain KATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfsK1(K:6-198)

Chain LATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfsL1(L:6-198)

Chain MATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfsM1(M:6-198)

Chain NATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfsN1(N:6-198)

Chain OATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfsO1(O:6-198)

Chain PATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfsP1(P:6-198)

Chain QATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfsQ1(Q:6-198)

Chain RATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfsR1(R:6-198)

Chain SATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfsS1(S:6-198)

Chain TATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfsT1(T:6-198)

Chain UATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfsU1(U:6-198)

All Domains (26)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6vfsA1	A:316-412	ClpB_D2-small	148 → 148.1 → 148.1.3
2	A	e6vfsA2	A:63-315	MCM, AAA_2	2004 → 2004.1 → 2004.1.1
3	B	e6vfsB1	B:316-412	ClpB_D2-small	148 → 148.1 → 148.1.3
4	B	e6vfsB2	B:63-315	MCM, AAA_2	2004 → 2004.1 → 2004.1.1
5	C	e6vfsC1	C:316-412	ClpB_D2-small	148 → 148.1 → 148.1.3
6	C	e6vfsC2	C:63-315	MCM, AAA_2	2004 → 2004.1 → 2004.1.1
7	D	e6vfsD1	D:63-315	MCM, AAA_2	2004 → 2004.1 → 2004.1.1
8	D	e6vfsD2	D:316-412	ClpB_D2-small	148 → 148.1 → 148.1.3
9	E	e6vfsE1	E:63-315	MCM, AAA_2	2004 → 2004.1 → 2004.1.1
10	E	e6vfsE2	E:316-412	ClpB_D2-small	148 → 148.1 → 148.1.3
11	F	e6vfsF1	F:311-412	ClpB_D2-small	148 → 148.1 → 148.1.3
12	F	e6vfsF2	F:63-251,F:289-310	MCM, AAA_2	2004 → 2004.1 → 2004.1.1
13	H	e6vfsH1	H:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
14	I	e6vfsI1	I:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
15	J	e6vfsJ1	J:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
16	K	e6vfsK1	K:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
17	L	e6vfsL1	L:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
18	M	e6vfsM1	M:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
19	N	e6vfsN1	N:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
20	O	e6vfsO1	O:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
21	P	e6vfsP1	P:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
22	Q	e6vfsQ1	Q:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
23	R	e6vfsR1	R:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
24	S	e6vfsS1	S:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
25	T	e6vfsT1	T:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
26	U	e6vfsU1	U:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors