ECODEvolutionary Classification of Protein Domains

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PDB 6VFX

ELECTRON MICROSCOPY21 chains26 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AATP-dependent Clp protease ATP-binding subunit ClpXview chain

2 domains

e6vfxA1(A:63-315)e6vfxA2(A:316-412)

Chain BATP-dependent Clp protease ATP-binding subunit ClpXview chain

2 domains

e6vfxB1(B:63-315)e6vfxB2(B:316-412)

Chain CATP-dependent Clp protease ATP-binding subunit ClpXview chain

2 domains

e6vfxC1(C:316-412)e6vfxC2(C:63-315)

Chain DATP-dependent Clp protease ATP-binding subunit ClpXview chain

2 domains

e6vfxD1(D:316-412)e6vfxD2(D:63-315)

Chain EATP-dependent Clp protease ATP-binding subunit ClpXview chain

2 domains

e6vfxE1(E:316-412)e6vfxE2(E:63-315)

Chain FATP-dependent Clp protease ATP-binding subunit ClpXview chain

2 domains

e6vfxF1(F:316-412)e6vfxF2(F:63-315)

Chain HATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfxH1(H:6-198)

Chain IATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfxI1(I:6-198)

Chain JATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfxJ1(J:6-198)

Chain KATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfxK1(K:6-198)

Chain LATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfxL1(L:6-198)

Chain MATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfxM1(M:6-198)

Chain NATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfxN1(N:6-198)

Chain OATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfxO1(O:6-198)

Chain PATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfxP1(P:6-198)

Chain QATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfxQ1(Q:6-198)

Chain RATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfxR1(R:6-198)

Chain SATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfxS1(S:6-198)

Chain TATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfxT1(T:6-198)

Chain UATP-dependent Clp protease proteolytic subunitview chain

1 domain

e6vfxU1(U:6-198)

All Domains (26)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6vfxA1	A:63-315	MCM, AAA_2	2004 → 2004.1 → 2004.1.1
2	A	e6vfxA2	A:316-412	ClpB_D2-small	148 → 148.1 → 148.1.3
3	B	e6vfxB1	B:63-315	MCM, AAA_2	2004 → 2004.1 → 2004.1.1
4	B	e6vfxB2	B:316-412	ClpB_D2-small	148 → 148.1 → 148.1.3
5	C	e6vfxC1	C:316-412	ClpB_D2-small	148 → 148.1 → 148.1.3
6	C	e6vfxC2	C:63-315	MCM, AAA_2	2004 → 2004.1 → 2004.1.1
7	D	e6vfxD1	D:316-412	ClpB_D2-small	148 → 148.1 → 148.1.3
8	D	e6vfxD2	D:63-315	MCM, AAA_2	2004 → 2004.1 → 2004.1.1
9	E	e6vfxE1	E:316-412	ClpB_D2-small	148 → 148.1 → 148.1.3
10	E	e6vfxE2	E:63-315	MCM, AAA_2	2004 → 2004.1 → 2004.1.1
11	F	e6vfxF1	F:316-412	ClpB_D2-small	148 → 148.1 → 148.1.3
12	F	e6vfxF2	F:63-315	MCM, AAA_2	2004 → 2004.1 → 2004.1.1
13	H	e6vfxH1	H:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
14	I	e6vfxI1	I:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
15	J	e6vfxJ1	J:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
16	K	e6vfxK1	K:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
17	L	e6vfxL1	L:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
18	M	e6vfxM1	M:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
19	N	e6vfxN1	N:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
20	O	e6vfxO1	O:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
21	P	e6vfxP1	P:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
22	Q	e6vfxQ1	Q:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
23	R	e6vfxR1	R:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
24	S	e6vfxS1	S:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
25	T	e6vfxT1	T:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1
26	U	e6vfxU1	U:6-198	CLP_protease	2486 → 2486.1 → 2486.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors