ECODEvolutionary Classification of Protein Domains

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PDB 6VMA

X-RAY DIFFRACTION2.75 Å5 chains7 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AMHC class I antigen, A-2 alpha chainview chain

2 domains

e6vmaA1(A:1-181)e6vmaA2(A:182-275)

Chain BBeta-2-microglobulinview chain

1 domain

e6vmaB1(B:1-100)

Chain DT4H2 T cell receptor alpha chainview chain

2 domains

e6vmaD1(D:2-112)e6vmaD2(D:113-202)

Chain ET4H2 T cell receptor beta chainview chain

2 domains

e6vmaE1(E:116-240)e6vmaE2(E:2-115)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6vmaA1	A:1-181	MHC_I	233 → 233.1 → 233.1.1
2	A	e6vmaA2	A:182-275	C1-set	11 → 11.1 → 11.1.1
3	B	e6vmaB1	B:1-100	C1-set	11 → 11.1 → 11.1.1
4	D	e6vmaD1	D:2-112	V-set	11 → 11.1 → 11.1.1
5	D	e6vmaD2	D:113-202	DUF1968	11 → 11.1 → 11.1.1
6	E	e6vmaE1	E:116-240	C1-set	11 → 11.1 → 11.1.1
7	E	e6vmaE2	E:2-115	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors