ECODEvolutionary Classification of Protein Domains

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PDB 6VRM

X-RAY DIFFRACTION2.61 Å5 chains7 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AMHC class I antigenview chain

2 domains

e6vrmA1(A:2-181)e6vrmA2(A:182-274)

Chain BBeta-2-microglobulinview chain

1 domain

e6vrmB1(B:1-100)

Chain DT-cell receptor 12-6, alfa chainview chain

2 domains

e6vrmD1(D:108-200)e6vrmD2(D:2-108)

Chain ETCR 12-6, beta chainview chain

2 domains

e6vrmE1(E:2-115)e6vrmE2(E:116-245)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6vrmA1	A:2-181	MHC_I	233 → 233.1 → 233.1.1
2	A	e6vrmA2	A:182-274	C1-set	11 → 11.1 → 11.1.1
3	B	e6vrmB1	B:1-100	C1-set	11 → 11.1 → 11.1.1
4	D	e6vrmD1	D:108-200	DUF1968	11 → 11.1 → 11.1.1
5	D	e6vrmD2	D:2-108	V-set	11 → 11.1 → 11.1.1
6	E	e6vrmE1	E:2-115	V-set	11 → 11.1 → 11.1.1
7	E	e6vrmE2	E:116-245	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors