ECODEvolutionary Classification of Protein Domains

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PDB 6WJ6

ELECTRON MICROSCOPY13 chains14 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain APhotosystem II protein D1 2view chain

1 domain

e6wj6A1(A:11-224,A:248-335)

Chain BPhotosystem II CP47 reaction center proteinview chain

2 domains

e6wj6B1(B:329-444)e6wj6B2(B:2-328,B:445-479)

Chain CPhotosystem II CP43 reaction center proteinview chain

1 domain

e6wj6C1(C:18-460)

Chain DPhotosystem II D2 proteinview chain

1 domain

e6wj6D1(D:11-352)

Chain ECytochrome b559 subunit alphaview chain

1 domain

e6wj6E1(E:9-80)

Chain FCytochrome b559 subunit betaview chain

1 domain

e6wj6F1(F:13-44)

Chain HPhotosystem II reaction center protein Hview chain

1 domain

e6wj6H1(H:2-64)

Chain IPhotosystem II reaction center protein Iview chain

1 domain

e6wj6I1(I:2-36)

Chain KPhotosystem II reaction center protein Kview chain

1 domain

e6wj6K1(K:9-43)

Chain LPhotosystem II reaction center protein Lview chain

1 domain

e6wj6L1(L:9-39)

Chain MPhotosystem II reaction center protein Mview chain

1 domain

e6wj6M1(M:2-30)

Chain TPhotosystem II reaction center protein Tview chain

1 domain

e6wj6T1(T:2-30)

Chain XPhotosystem II reaction center X proteinview chain

1 domain

e6wj6X1(X:1-35)

All Domains (14)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6wj6A1	A:11-224,A:248-335	Photo_RC	5037 → 5037.1 → 5037.1.1
2	B	e6wj6B1	B:329-444	PSII	3744 → 3744.1 → 3744.1.1
3	B	e6wj6B2	B:2-328,B:445-479	PSII	5075 → 5075.1 → 5075.1.1
4	C	e6wj6C1	C:18-460	PSII	5075 → 5075.1 → 5075.1.1
5	D	e6wj6D1	D:11-352	Photo_RC	5037 → 5037.1 → 5037.1.1
6	E	e6wj6E1	E:9-80	Cytochrom_B559,Cytochrom_B559a	5036 → 5036.1 → 5036.1.1
7	F	e6wj6F1	F:13-44	Cytochrom_B559	5036 → 5036.1 → 5036.1.1
8	H	e6wj6H1	H:2-64	PsbH	5032 → 5032.1 → 5032.1.1
9	I	e6wj6I1	I:2-36	PsbI	5035 → 5035.1 → 5035.1.1
10	K	e6wj6K1	K:9-43	PsbK	5034 → 5034.1 → 5034.1.1
11	L	e6wj6L1	L:9-39	PsbL	5030 → 5030.1 → 5030.1.1
12	M	e6wj6M1	M:2-30	PsbM	5033 → 5033.1 → 5033.1.1
13	T	e6wj6T1	T:2-30	PsbT	3390 → 3390.1 → 3390.1.1
14	X	e6wj6X1	X:1-35	PsbX	3493 → 3493.1 → 3493.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors