ECODEvolutionary Classification of Protein Domains

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PDB 6X62

ELECTRON MICROSCOPY117 chains52 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AdDotDview chain

1 domain

e6x62Ad1(Ad:110-163)

Chain ADDotDview chain

1 domain

e6x62AD1(AD:110-163)

Chain AKInner membrane lipoprotein YiaDview chain

1 domain

e6x62AK1(AK:41-188)

Chain BdDotDview chain

1 domain

e6x62Bd1(Bd:110-163)

Chain BDDotDview chain

1 domain

e6x62BD1(BD:110-163)

Chain BKInner membrane lipoprotein YiaDview chain

1 domain

e6x62BK1(BK:41-188)

Chain CdDotDview chain

1 domain

e6x62Cd1(Cd:110-163)

Chain CDDotDview chain

1 domain

e6x62CD1(CD:110-163)

Chain CKInner membrane lipoprotein YiaDview chain

1 domain

e6x62CK1(CK:41-188)

Chain DdDotDview chain

1 domain

e6x62Dd01(Dd:110-163)

Chain DDDotDview chain

1 domain

e6x62DD1(DD:110-163)

Chain DKInner membrane lipoprotein YiaDview chain

1 domain

e6x62DK1(DK:41-188)

Chain EdDotDview chain

1 domain

e6x62Ed1(Ed:110-163)

Chain EDDotDview chain

1 domain

e6x62ED1(ED:110-163)

Chain EKInner membrane lipoprotein YiaDview chain

1 domain

e6x62EK1(EK:41-188)

Chain FdDotDview chain

1 domain

e6x62Fd1(Fd:110-163)

Chain FDDotDview chain

1 domain

e6x62FD1(FD:110-163)

Chain FKInner membrane lipoprotein YiaDview chain

1 domain

e6x62FK1(FK:41-188)

Chain GdDotDview chain

1 domain

e6x62Gd1(Gd:110-163)

Chain GDDotDview chain

1 domain

e6x62GD1(GD:110-163)

Chain GKInner membrane lipoprotein YiaDview chain

1 domain

e6x62GK1(GK:41-188)

Chain HdDotDview chain

1 domain

e6x62Hd1(Hd:110-163)

Chain HDDotDview chain

1 domain

e6x62HD1(HD:110-163)

Chain HKInner membrane lipoprotein YiaDview chain

1 domain

e6x62HK1(HK:41-188)

Chain IdDotDview chain

1 domain

e6x62Id1(Id:110-163)

Chain IDDotDview chain

1 domain

e6x62ID1(ID:110-163)

Chain IKInner membrane lipoprotein YiaDview chain

1 domain

e6x62IK1(IK:41-188)

Chain JdDotDview chain

1 domain

e6x62Jd1(Jd:110-163)

Chain JDDotDview chain

1 domain

e6x62JD1(JD:110-163)

Chain JKInner membrane lipoprotein YiaDview chain

1 domain

e6x62JK1(JK:41-188)

Chain KdDotDview chain

1 domain

e6x62Kd1(Kd:110-163)

Chain KDDotDview chain

1 domain

e6x62KD1(KD:110-163)

Chain KKInner membrane lipoprotein YiaDview chain

1 domain

e6x62KK1(KK:41-188)

Chain LdDotDview chain

1 domain

e6x62Ld1(Ld:110-163)

Chain LDDotDview chain

1 domain

e6x62LD1(LD:110-163)

Chain LKInner membrane lipoprotein YiaDview chain

1 domain

e6x62LK1(LK:41-188)

Chain MdDotDview chain

1 domain

e6x62Md1(Md:110-163)

Chain MDDotDview chain

1 domain

e6x62MD1(MD:110-163)

Chain MKInner membrane lipoprotein YiaDview chain

1 domain

e6x62MK1(MK:41-188)

Chain NType IV secretion system unknown protein fragmentview chain

1 domain

e6x62N1(N:99-234)

Chain OType IV secretion system unknown protein fragmentview chain

1 domain

e6x62O1(O:99-234)

Chain PType IV secretion system unknown protein fragmentview chain

1 domain

e6x62P1(P:99-234)

Chain QType IV secretion system unknown protein fragmentview chain

1 domain

e6x62Q1(Q:99-234)

Chain RType IV secretion system unknown protein fragmentview chain

1 domain

e6x62R1(R:99-234)

Chain SType IV secretion system unknown protein fragmentview chain

1 domain

e6x62S1(S:99-234)

Chain TType IV secretion system unknown protein fragmentview chain

1 domain

e6x62T1(T:99-234)

Chain UType IV secretion system unknown protein fragmentview chain

1 domain

e6x62U1(U:99-234)

Chain VType IV secretion system unknown protein fragmentview chain

1 domain

e6x62V1(V:99-234)

Chain WType IV secretion system unknown protein fragmentview chain

1 domain

e6x62W1(W:99-234)

Chain XType IV secretion system unknown protein fragmentview chain

1 domain

e6x62X1(X:99-234)

Chain YType IV secretion system unknown protein fragmentview chain

1 domain

e6x62Y1(Y:99-234)

Chain ZType IV secretion system unknown protein fragmentview chain

1 domain

e6x62Z1(Z:99-234)

All Domains (52)

#	Chain	Domain ID	Range	Family	Classification
1	Ad	e6x62Ad1	Ad:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
2	AD	e6x62AD1	AD:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
3	AK	e6x62AK1	AK:41-188	OmpA	301 → 301.3 → 301.3.1
4	Bd	e6x62Bd1	Bd:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
5	BD	e6x62BD1	BD:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
6	BK	e6x62BK1	BK:41-188	OmpA	301 → 301.3 → 301.3.1
7	Cd	e6x62Cd1	Cd:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
8	CD	e6x62CD1	CD:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
9	CK	e6x62CK1	CK:41-188	OmpA	301 → 301.3 → 301.3.1
10	Dd	e6x62Dd01	Dd:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
11	DD	e6x62DD1	DD:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
12	DK	e6x62DK1	DK:41-188	OmpA	301 → 301.3 → 301.3.1
13	Ed	e6x62Ed1	Ed:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
14	ED	e6x62ED1	ED:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
15	EK	e6x62EK1	EK:41-188	OmpA	301 → 301.3 → 301.3.1
16	Fd	e6x62Fd1	Fd:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
17	FD	e6x62FD1	FD:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
18	FK	e6x62FK1	FK:41-188	OmpA	301 → 301.3 → 301.3.1
19	Gd	e6x62Gd1	Gd:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
20	GD	e6x62GD1	GD:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
21	GK	e6x62GK1	GK:41-188	OmpA	301 → 301.3 → 301.3.1
22	Hd	e6x62Hd1	Hd:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
23	HD	e6x62HD1	HD:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
24	HK	e6x62HK1	HK:41-188	OmpA	301 → 301.3 → 301.3.1
25	Id	e6x62Id1	Id:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
26	ID	e6x62ID1	ID:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
27	IK	e6x62IK1	IK:41-188	OmpA	301 → 301.3 → 301.3.1
28	Jd	e6x62Jd1	Jd:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
29	JD	e6x62JD1	JD:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
30	JK	e6x62JK1	JK:41-188	OmpA	301 → 301.3 → 301.3.1
31	Kd	e6x62Kd1	Kd:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
32	KD	e6x62KD1	KD:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
33	KK	e6x62KK1	KK:41-188	OmpA	301 → 301.3 → 301.3.1
34	Ld	e6x62Ld1	Ld:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
35	LD	e6x62LD1	LD:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
36	LK	e6x62LK1	LK:41-188	OmpA	301 → 301.3 → 301.3.1
37	Md	e6x62Md1	Md:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
38	MD	e6x62MD1	MD:110-163	3070.1.1.0	3070 → 3070.1 → 3070.1.1
39	MK	e6x62MK1	MK:41-188	OmpA	301 → 301.3 → 301.3.1
40	N	e6x62N1	N:99-234	OmpA	301 → 301.3 → 301.3.1
41	O	e6x62O1	O:99-234	OmpA	301 → 301.3 → 301.3.1
42	P	e6x62P1	P:99-234	OmpA	301 → 301.3 → 301.3.1
43	Q	e6x62Q1	Q:99-234	OmpA	301 → 301.3 → 301.3.1
44	R	e6x62R1	R:99-234	OmpA	301 → 301.3 → 301.3.1
45	S	e6x62S1	S:99-234	OmpA	301 → 301.3 → 301.3.1
46	T	e6x62T1	T:99-234	OmpA	301 → 301.3 → 301.3.1
47	U	e6x62U1	U:99-234	OmpA	301 → 301.3 → 301.3.1
48	V	e6x62V1	V:99-234	OmpA	301 → 301.3 → 301.3.1
49	W	e6x62W1	W:99-234	OmpA	301 → 301.3 → 301.3.1
50	X	e6x62X1	X:99-234	OmpA	301 → 301.3 → 301.3.1
51	Y	e6x62Y1	Y:99-234	OmpA	301 → 301.3 → 301.3.1
52	Z	e6x62Z1	Z:99-234	OmpA	301 → 301.3 → 301.3.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors