ECODEvolutionary Classification of Protein Domains

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PDB 6XCP

X-RAY DIFFRACTION3.30 Å4 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AMHC class II HLA-DQ-alpha chainview chain

2 domains

e6xcpA1(A:82-180)e6xcpA2(A:0-81)

Chain CHybrid insulin peptide, MHC class II HLA-DQ8-beta chain fusionview chain

2 domains

e6xcpC1(C:119-219)e6xcpC2(C:-2-118)

Chain DT-CELL-RECEPTOR, A2.13-alpha chainview chain

2 domains

e6xcpD1(D:2-126)e6xcpD2(D:127-217)

Chain ET-CELL-RECEPTOR, A2.13-beta chainview chain

2 domains

e6xcpE1(E:3-127)e6xcpE2(E:128-254)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6xcpA1	A:82-180	C1-set	11 → 11.1 → 11.1.1
2	A	e6xcpA2	A:0-81	MHC_II_alpha	233 → 233.1 → 233.1.1
3	C	e6xcpC1	C:119-219	C1-set	11 → 11.1 → 11.1.1
4	C	e6xcpC2	C:-2-118	MHC_II_beta	233 → 233.1 → 233.1.1
5	D	e6xcpD1	D:2-126	V-set	11 → 11.1 → 11.1.1
6	D	e6xcpD2	D:127-217	DUF1968	11 → 11.1 → 11.1.1
7	E	e6xcpE1	E:3-127	V-set	11 → 11.1 → 11.1.1
8	E	e6xcpE2	E:128-254	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors