ECODEvolutionary Classification of Protein Domains

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PDB 6XGC

ELECTRON MICROSCOPY12 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AHemagglutinin HA1 chainview chain

1 domain

e6xgcA1(A:11-333)

Chain BHemagglutinin HA2 chainview chain

1 domain

e6xgcB1(B:10-173)

Chain CHemagglutinin HA1 chainview chain

1 domain

e6xgcC1(C:11-333)

Chain DHemagglutinin HA2 chainview chain

1 domain

e6xgcD1(D:10-173)

Chain EHemagglutinin HA1 chainview chain

1 domain

e6xgcE1(E:11-333)

Chain FHemagglutinin HA2 chainview chain

1 domain

e6xgcF1(F:10-173)

Chain H1C4 Fab heavy chainview chain

1 domain

e6xgcH1(H:1-125)

Chain I1C4 Fab heavy chainview chain

1 domain

e6xgcI1(I:1-125)

Chain J1C4 Fab light chainview chain

1 domain

e6xgcJ1(J:9-115)

Chain L1C4 Fab light chainview chain

1 domain

e6xgcL1(L:9-115)

Chain M1C4 Fab heavy chainview chain

1 domain

e6xgcM1(M:1-125)

Chain N1C4 Fab light chainview chain

1 domain

e6xgcN1(N:9-115)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6xgcA1	A:11-333	Hemagglutinin	10 → 10.5 → 10.5.1
2	B	e6xgcB1	B:10-173	Hemagglutinin	3847 → 3847.1 → 3847.1.1
3	C	e6xgcC1	C:11-333	Hemagglutinin	10 → 10.5 → 10.5.1
4	D	e6xgcD1	D:10-173	Hemagglutinin	3847 → 3847.1 → 3847.1.1
5	E	e6xgcE1	E:11-333	Hemagglutinin	10 → 10.5 → 10.5.1
6	F	e6xgcF1	F:10-173	Hemagglutinin	3847 → 3847.1 → 3847.1.1
7	H	e6xgcH1	H:1-125	V-set	11 → 11.1 → 11.1.1
8	I	e6xgcI1	I:1-125	V-set	11 → 11.1 → 11.1.1
9	J	e6xgcJ1	J:9-115	V-set	11 → 11.1 → 11.1.1
10	L	e6xgcL1	L:9-115	V-set	11 → 11.1 → 11.1.1
11	M	e6xgcM1	M:1-125	V-set	11 → 11.1 → 11.1.1
12	N	e6xgcN1	N:9-115	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors