ECODEvolutionary Classification of Protein Domains

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PDB 6XNG

X-RAY DIFFRACTION2.79 Å4 chains7 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AAntigen-presenting glycoprotein CD1d1view chain

2 domains

e6xngA1(A:6-185)e6xngA2(A:185-299)

Chain BBeta-2-microglobulinview chain

1 domain

e6xngB1(B:1-99)

Chain CNKT Valpha14 (Mouse)-2C12 TCRview chain

2 domains

e6xngC1(C:1-115)e6xngC2(C:116-205)

Chain DNKT Vbeta8.2 (Mouse)-2C12 TCRview chain

2 domains

e6xngD1(D:1-114)e6xngD2(D:115-241)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6xngA1	A:6-185	MHC_I_3	233 → 233.1 → 233.1.1
2	A	e6xngA2	A:185-299	C1-set	11 → 11.1 → 11.1.1
3	B	e6xngB1	B:1-99	C1-set	11 → 11.1 → 11.1.1
4	C	e6xngC1	C:1-115	V-set	11 → 11.1 → 11.1.1
5	C	e6xngC2	C:116-205	DUF1968	11 → 11.1 → 11.1.1
6	D	e6xngD1	D:1-114	V-set	11 → 11.1 → 11.1.1
7	D	e6xngD2	D:115-241	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors