ECODEvolutionary Classification of Protein Domains

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PDB 6XP5

ELECTRON MICROSCOPY15 chains10 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain FMediator of RNA polymerase II transcription subunit 6view chain

1 domain

e6xp5F1(F:13-170,F:192-207)

Chain GMediator of RNA polymerase II transcription subunit 7view chain

2 domains

e6xp5G1(G:12-37,G:98-126)e6xp5G2(G:127-198)

Chain HMediator of RNA polymerase II transcription subunit 8view chain

1 domain

e6xp5H1(H:7-117,H:160-194)

Chain KMediator of RNA polymerase II transcription subunit 11view chain

1 domain

e6xp5K1(K:18-58,K:93-130)

Chain QMediator of RNA polymerase II transcription subunit 17view chain

1 domain

e6xp5Q01(Q:91-360,Q:387-403)

Chain RMediator of RNA polymerase II transcription subunit 18view chain

1 domain

e6xp5R1(R:2-248)

Chain UMediator of RNA polymerase II transcription subunit 21view chain

1 domain

e6xp5U1(U:3-137)

Chain VMed22view chain

1 domain

e6xp5V1(V:13-124)

Chain ZMediator of RNA polymerase II transcription subunit 31view chain

1 domain

e6xp5Z1(Z:23-122)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	F	e6xp5F1	F:13-170,F:192-207	Med6	3195 → 3195.1 → 3195.1.1
2	G	e6xp5G1	G:12-37,G:98-126	Med7	3548 → 3548.1 → 3548.1.1
3	G	e6xp5G2	G:127-198	Med7	4207 → 4207.1 → 4207.1.2
4	H	e6xp5H1	H:7-117,H:160-194	Med8	3560 → 3560.1 → 3560.1.1
5	K	e6xp5K1	K:18-58,K:93-130	Med11	3712 → 3712.1 → 3712.1.1
6	Q	e6xp5Q01	Q:91-360,Q:387-403	Med17	3561 → 3561.1 → 3561.1.1
7	R	e6xp5R1	R:2-248	Med18	868 → 868.1 → 868.1.1
8	U	e6xp5U1	U:3-137	Med21	4207 → 4207.1 → 4207.1.1
9	V	e6xp5V1	V:13-124	Med22	3559 → 3559.1 → 3559.1.1
10	Z	e6xp5Z1	Z:23-122	Med31	3548 → 3548.1 → 3548.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors