ECODEvolutionary Classification of Protein Domains

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PDB 6Y60

X-RAY DIFFRACTION1.80 Å10 chains10 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AAACapsid protein VP1view chain

1 domain

e6y60AAA1(AAA:40-299)

Chain BBBCapsid protein VP1view chain

1 domain

e6y60BBB1(BBB:40-299)

Chain CCCCapsid protein VP1view chain

1 domain

e6y60CCC1(CCC:41-298)

Chain DDDCapsid protein VP1view chain

1 domain

e6y60DDD1(DDD:41-299)

Chain EEECapsid protein VP1view chain

1 domain

e6y60EEE1(EEE:40-299)

Chain FFFCapsid protein VP1view chain

1 domain

e6y60FFF1(FFF:41-299)

Chain GGGCapsid protein VP1view chain

1 domain

e6y60GGG1(GGG:41-298)

Chain HHHCapsid protein VP1view chain

1 domain

e6y60HHH1(HHH:41-298)

Chain IIICapsid protein VP1view chain

1 domain

e6y60III1(III:41-298)

Chain JJJCapsid protein VP1view chain

1 domain

e6y60JJJ1(JJJ:40-299)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	AAA	e6y60AAA1	AAA:40-299	Polyoma_coat	10 → 10.2 → 10.2.1
2	BBB	e6y60BBB1	BBB:40-299	Polyoma_coat	10 → 10.2 → 10.2.1
3	CCC	e6y60CCC1	CCC:41-298	Polyoma_coat	10 → 10.2 → 10.2.1
4	DDD	e6y60DDD1	DDD:41-299	Polyoma_coat	10 → 10.2 → 10.2.1
5	EEE	e6y60EEE1	EEE:40-299	Polyoma_coat	10 → 10.2 → 10.2.1
6	FFF	e6y60FFF1	FFF:41-299	Polyoma_coat	10 → 10.2 → 10.2.1
7	GGG	e6y60GGG1	GGG:41-298	Polyoma_coat	10 → 10.2 → 10.2.1
8	HHH	e6y60HHH1	HHH:41-298	Polyoma_coat	10 → 10.2 → 10.2.1
9	III	e6y60III1	III:41-298	Polyoma_coat	10 → 10.2 → 10.2.1
10	JJJ	e6y60JJJ1	JJJ:40-299	Polyoma_coat	10 → 10.2 → 10.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors