ECODEvolutionary Classification of Protein Domains

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PDB 6Y65

X-RAY DIFFRACTION1.45 Å10 chains10 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AAACapsid protein VP1view chain

1 domain

e6y65AAA1(AAA:22-286)

Chain BBBCapsid protein VP1view chain

1 domain

e6y65BBB1(BBB:22-286)

Chain CCCCapsid protein VP1view chain

1 domain

e6y65CCC1(CCC:22-286)

Chain DDDCapsid protein VP1view chain

1 domain

e6y65DDD1(DDD:22-286)

Chain EEECapsid protein VP1view chain

1 domain

e6y65EEE1(EEE:23-286)

Chain FFFCapsid protein VP1view chain

1 domain

e6y65FFF1(FFF:19-286)

Chain GGGCapsid protein VP1view chain

1 domain

e6y65GGG1(GGG:20-286)

Chain HHHCapsid protein VP1view chain

1 domain

e6y65HHH1(HHH:19-286)

Chain IIICapsid protein VP1view chain

1 domain

e6y65III1(III:20-286)

Chain JJJCapsid protein VP1view chain

1 domain

e6y65JJJ1(JJJ:23-286)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	AAA	e6y65AAA1	AAA:22-286	Polyoma_coat	10 → 10.2 → 10.2.1
2	BBB	e6y65BBB1	BBB:22-286	Polyoma_coat	10 → 10.2 → 10.2.1
3	CCC	e6y65CCC1	CCC:22-286	Polyoma_coat	10 → 10.2 → 10.2.1
4	DDD	e6y65DDD1	DDD:22-286	Polyoma_coat	10 → 10.2 → 10.2.1
5	EEE	e6y65EEE1	EEE:23-286	Polyoma_coat	10 → 10.2 → 10.2.1
6	FFF	e6y65FFF1	FFF:19-286	Polyoma_coat	10 → 10.2 → 10.2.1
7	GGG	e6y65GGG1	GGG:20-286	Polyoma_coat	10 → 10.2 → 10.2.1
8	HHH	e6y65HHH1	HHH:19-286	Polyoma_coat	10 → 10.2 → 10.2.1
9	III	e6y65III1	III:20-286	Polyoma_coat	10 → 10.2 → 10.2.1
10	JJJ	e6y65JJJ1	JJJ:23-286	Polyoma_coat	10 → 10.2 → 10.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors