ECODEvolutionary Classification of Protein Domains

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PDB 6ZOO

ELECTRON MICROSCOPY17 chains19 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 1Chlorophyll a-b binding protein 6, chloroplasticview chain

1 domain

e6zoo11(1:40-232)

Chain 2Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e6zoo21(2:58-265)

Chain 3Chlorophyll a-b binding protein 3, chloroplasticview chain

1 domain

e6zoo31(3:55-275)

Chain 4Chlorophyll a-b binding protein P4, chloroplasticview chain

1 domain

e6zoo41(4:52-249)

Chain APhotosystem I P700 chlorophyll a apoprotein A1view chain

2 domains

e6zooA1(A:420-758)e6zooA2(A:16-419)

Chain BPhotosystem I P700 chlorophyll a apoprotein A2view chain

2 domains

e6zooB1(B:405-734)e6zooB2(B:2-404)

Chain CPhotosystem I iron-sulfur centerview chain

1 domain

e6zooC1(C:2-81)

Chain DPsaDview chain

1 domain

e6zooD1(D:69-211)

Chain EPutative uncharacterized proteinview chain

1 domain

e6zooE1(E:64-129)

Chain FPhotosystem I reaction center subunit IIIview chain

1 domain

e6zooF1(F:78-231)

Chain Gphotosystem I reaction centerview chain

1 domain

e6zooG1(G:58-154)

Chain HPhotosystem I reaction center subunit VI,Photosystem I reaction center subunit VIview chain

1 domain

e6zooH1(H:48-140)

Chain IPhotosystem I reaction center subunit VIIIview chain

1 domain

e6zooI1(I:2-32)

Chain JPhotosystem I reaction center subunit IXview chain

1 domain

e6zooJ1(J:1-42)

Chain KPhotosystem I reaction center subunit X psaKview chain

1 domain

e6zooK1(K:46-126)

Chain LPsaL domain-containing proteinview chain

1 domain

e6zooL1(L:54-212)

Chain PPlastocyanin, chloroplasticview chain

1 domain

e6zooP1(P:1-99)

All Domains (19)

#	Chain	Domain ID	Range	Family	Classification
1	1	e6zoo11	1:40-232	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
2	2	e6zoo21	2:58-265	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
3	3	e6zoo31	3:55-275	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
4	4	e6zoo41	4:52-249	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
5	A	e6zooA1	A:420-758	PsaA_PsaB	5037 → 5037.1 → 5037.1.1
6	A	e6zooA2	A:16-419	PsaA_PsaB	5075 → 5075.1 → 5075.1.1
7	B	e6zooB1	B:405-734	PsaA_PsaB	5037 → 5037.1 → 5037.1.1
8	B	e6zooB2	B:2-404	PsaA_PsaB	5075 → 5075.1 → 5075.1.1
9	C	e6zooC1	C:2-81	Fer4, Fer4_21	205 → 205.1 → 205.1.1
10	D	e6zooD1	D:69-211	PsaD	834 → 834.1 → 834.1.1
11	E	e6zooE1	E:64-129	PSI_PsaE	4 → 4.1 → 4.1.1
12	F	e6zooF1	F:78-231	PSI_PsaF	5019 → 5019.1 → 5019.1.1
13	G	e6zooG1	G:58-154	PSI_PSAK	5063 → 5063.1 → 5063.1.1
14	H	e6zooH1	H:48-140	PSI_PsaH	6037 → 6037.1 → 6037.1.1
15	I	e6zooI1	I:2-32	PSI_8	5020 → 5020.1 → 5020.1.1
16	J	e6zooJ1	J:1-42	PSI_PsaJ	5021 → 5021.1 → 5021.1.1
17	K	e6zooK1	K:46-126	PSI_PSAK	5063 → 5063.1 → 5063.1.1
18	L	e6zooL1	L:54-212	PsaL	5064 → 5064.1 → 5064.1.1
19	P	e6zooP1	P:1-99	Copper-bind	3156 → 3156.1 → 3156.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors