ECODEvolutionary Classification of Protein Domains

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PDB 7EBR

ELECTRON MICROSCOPY6 chains6 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ACapsid protein VP1view chain

1 domain

e7ebrA1(A:1-289)

Chain BCapsid protein VP3view chain

1 domain

e7ebrB1(B:1-234)

Chain CCapsid protein VP2view chain

1 domain

e7ebrC1(C:13-244)

Chain DCapsid protein VP4view chain

1 domain

e7ebrD1(D:30-57)

Chain E2H12 Fab heavy chainview chain

1 domain

e7ebrE1(E:1-119)

Chain F2H12 Fab light chainview chain

1 domain

e7ebrF1(F:1-109)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	A	e7ebrA1	A:1-289	Rhv_5	10 → 10.2 → 10.2.1
2	B	e7ebrB1	B:1-234	Rhv	10 → 10.2 → 10.2.1
3	C	e7ebrC1	C:13-244	Rhv	10 → 10.2 → 10.2.1
4	D	e7ebrD1	D:30-57	Pico_P1A	10 → 10.2 → 10.2.1
5	E	e7ebrE1	E:1-119	V-set	11 → 11.1 → 11.1.1
6	F	e7ebrF1	F:1-109	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors