ECODEvolutionary Classification of Protein Domains

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PDB 7EQD

ELECTRON MICROSCOPY35 chains36 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 0Light-harvesting protein B-870 beta chainview chain

1 domain

e7eqd01(0:12-56)

Chain 1Light-harvesting protein B-870 alpha chainview chain

1 domain

e7eqd11(1:1-47)

Chain 2Light-harvesting protein B-870 beta chainview chain

1 domain

e7eqd21(2:13-56)

Chain 3Light-harvesting protein B-870 alpha chainview chain

1 domain

e7eqd31(3:1-47)

Chain 4Light-harvesting protein B-870 beta chainview chain

1 domain

e7eqd41(4:12-56)

Chain 5Light-harvesting protein B-870 alpha chainview chain

1 domain

e7eqd51(5:1-47)

Chain 6Light-harvesting protein B-870 beta chainview chain

1 domain

e7eqd61(6:12-56)

Chain 7Light-harvesting protein B-870 alpha chainview chain

1 domain

e7eqd71(7:1-47)

Chain 8Light-harvesting protein B-870 beta chainview chain

1 domain

e7eqd81(8:13-56)

Chain 9Light-harvesting protein B-870 alpha chainview chain

1 domain

e7eqd91(9:1-47)

Chain ALight-harvesting protein B-870 alpha chainview chain

1 domain

e7eqdA1(A:1-47)

Chain BLight-harvesting protein B-870 beta chainview chain

1 domain

e7eqdB1(B:12-56)

Chain DLight-harvesting protein B-870 alpha chainview chain

1 domain

e7eqdD1(D:1-47)

Chain ELight-harvesting protein B-870 beta chainview chain

1 domain

e7eqdE1(E:13-56)

Chain FLight-harvesting protein B-870 alpha chainview chain

1 domain

e7eqdF1(F:1-47)

Chain GLight-harvesting protein B-870 beta chainview chain

1 domain

e7eqdG1(G:12-56)

Chain HPhotoreaction center protein Hview chain

2 domains

e7eqdH1(H:36-257)e7eqdH2(H:2-35)

Chain ILight-harvesting protein B-870 alpha chainview chain

1 domain

e7eqdI1(I:1-47)

Chain JLight-harvesting protein B-870 beta chainview chain

1 domain

e7eqdJ1(J:12-56)

Chain KLight-harvesting protein B-870 alpha chainview chain

1 domain

e7eqdK1(K:1-47)

Chain LReaction center protein L chainview chain

1 domain

e7eqdL1(L:2-276)

Chain MReaction center protein M chainview chain

1 domain

e7eqdM1(M:3-306)

Chain NLight-harvesting protein B-870 beta chainview chain

1 domain

e7eqdN1(N:12-56)

Chain OLight-harvesting protein B-870 alpha chainview chain

1 domain

e7eqdO1(O:1-47)

Chain PLight-harvesting protein B-870 beta chainview chain

1 domain

e7eqdP1(P:13-56)

Chain QLight-harvesting protein B-870 alpha chainview chain

1 domain

e7eqdQ1(Q:1-47)

Chain RLight-harvesting protein B-870 beta chainview chain

1 domain

e7eqdR1(R:12-56)

Chain SLight-harvesting protein B-870 alpha chainview chain

1 domain

e7eqdS1(S:1-47)

Chain TLight-harvesting protein B-870 beta chainview chain

1 domain

e7eqdT1(T:12-56)

Chain ULight-harvesting protein B-870 alpha chainview chain

1 domain

e7eqdU1(U:1-47)

Chain VLight-harvesting protein B-870 beta chainview chain

1 domain

e7eqdV1(V:12-56)

Chain WLight-harvesting protein B-870 alpha chainview chain

1 domain

e7eqdW1(W:1-47)

Chain XLight-harvesting protein B-870 beta chainview chain

1 domain

e7eqdX1(X:12-56)

Chain YLight-harvesting protein B-870 alpha chainview chain

1 domain

e7eqdY1(Y:1-47)

Chain ZLight-harvesting protein B-870 beta chainview chain

1 domain

e7eqdZ1(Z:13-56)

All Domains (36)

#	Chain	Domain ID	Range	Family	Classification
1	0	e7eqd01	0:12-56	LHC	5074 → 5074.1 → 5074.1.1
2	1	e7eqd11	1:1-47	LHC	5074 → 5074.1 → 5074.1.1
3	2	e7eqd21	2:13-56	LHC	5074 → 5074.1 → 5074.1.1
4	3	e7eqd31	3:1-47	LHC	5074 → 5074.1 → 5074.1.1
5	4	e7eqd41	4:12-56	LHC	5074 → 5074.1 → 5074.1.1
6	5	e7eqd51	5:1-47	LHC	5074 → 5074.1 → 5074.1.1
7	6	e7eqd61	6:12-56	LHC	5074 → 5074.1 → 5074.1.1
8	7	e7eqd71	7:1-47	LHC	5074 → 5074.1 → 5074.1.1
9	8	e7eqd81	8:13-56	LHC	5074 → 5074.1 → 5074.1.1
10	9	e7eqd91	9:1-47	LHC	5074 → 5074.1 → 5074.1.1
11	A	e7eqdA1	A:1-47	LHC	5074 → 5074.1 → 5074.1.1
12	B	e7eqdB1	B:12-56	LHC	5074 → 5074.1 → 5074.1.1
13	D	e7eqdD1	D:1-47	LHC	5074 → 5074.1 → 5074.1.1
14	E	e7eqdE1	E:13-56	LHC	5074 → 5074.1 → 5074.1.1
15	F	e7eqdF1	F:1-47	LHC	5074 → 5074.1 → 5074.1.1
16	G	e7eqdG1	G:12-56	LHC	5074 → 5074.1 → 5074.1.1
17	H	e7eqdH1	H:36-257	Photosynthetic reaction centre, H-chain N-terminal region / PRC-barrel domain	4 → 4.6 → 4.6.1
18	H	e7eqdH2	H:2-35	PRCH	5002 → 5002.1 → 5002.1.1
19	I	e7eqdI1	I:1-47	LHC	5074 → 5074.1 → 5074.1.1
20	J	e7eqdJ1	J:12-56	LHC	5074 → 5074.1 → 5074.1.1
21	K	e7eqdK1	K:1-47	LHC	5074 → 5074.1 → 5074.1.1
22	L	e7eqdL1	L:2-276	Photo_RC	5037 → 5037.1 → 5037.1.1
23	M	e7eqdM1	M:3-306	Photo_RC	5037 → 5037.1 → 5037.1.1
24	N	e7eqdN1	N:12-56	LHC	5074 → 5074.1 → 5074.1.1
25	O	e7eqdO1	O:1-47	LHC	5074 → 5074.1 → 5074.1.1
26	P	e7eqdP1	P:13-56	LHC	5074 → 5074.1 → 5074.1.1
27	Q	e7eqdQ1	Q:1-47	LHC	5074 → 5074.1 → 5074.1.1
28	R	e7eqdR1	R:12-56	LHC	5074 → 5074.1 → 5074.1.1
29	S	e7eqdS1	S:1-47	LHC	5074 → 5074.1 → 5074.1.1
30	T	e7eqdT1	T:12-56	LHC	5074 → 5074.1 → 5074.1.1
31	U	e7eqdU1	U:1-47	LHC	5074 → 5074.1 → 5074.1.1
32	V	e7eqdV1	V:12-56	LHC	5074 → 5074.1 → 5074.1.1
33	W	e7eqdW1	W:1-47	LHC	5074 → 5074.1 → 5074.1.1
34	X	e7eqdX1	X:12-56	LHC	5074 → 5074.1 → 5074.1.1
35	Y	e7eqdY1	Y:1-47	LHC	5074 → 5074.1 → 5074.1.1
36	Z	e7eqdZ1	Z:13-56	LHC	5074 → 5074.1 → 5074.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors