ECODEvolutionary Classification of Protein Domains

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PDB 7FCP

X-RAY DIFFRACTION2.40 Å5 chains9 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ASpike protein S1view chain

1 domain

e7fcpA1(A:334-518)

Chain BP5-22 antibody Fab fragment heavy chainview chain

2 domains

e7fcpB1(B:1-120)e7fcpB2(B:121-223)

Chain DP5-22 antibody Fab fragment light chainview chain

2 domains

e7fcpD1(D:1-107)e7fcpD2(D:108-214)

Chain HP14-44 antibody Fab fragment heavy chainview chain

2 domains

e7fcpH1(H:129-232)e7fcpH2(H:1-128)

Chain LP14-44 antibody Fab fragment light chainview chain

2 domains

e7fcpL1(L:112-215)e7fcpL2(L:1-111)

All Domains (9)

#	Chain	Domain ID	Range	Family	Classification
1	A	e7fcpA1	A:334-518	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
2	B	e7fcpB1	B:1-120	V-set	11 → 11.1 → 11.1.1
3	B	e7fcpB2	B:121-223	C1-set	11 → 11.1 → 11.1.1
4	D	e7fcpD1	D:1-107	V-set	11 → 11.1 → 11.1.1
5	D	e7fcpD2	D:108-214	C1-set	11 → 11.1 → 11.1.1
6	H	e7fcpH1	H:129-232	C1-set	11 → 11.1 → 11.1.1
7	H	e7fcpH2	H:1-128	V-set	11 → 11.1 → 11.1.1
8	L	e7fcpL1	L:112-215	C1-set	11 → 11.1 → 11.1.1
9	L	e7fcpL2	L:1-111	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors