ECODEvolutionary Classification of Protein Domains

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PDB 7M7W

X-RAY DIFFRACTION2.65 Å10 chains18 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AMonoclonal antibody S2X259 Fab heavy chainview chain

2 domains

e7m7wA1(A:127-228)e7m7wA2(A:2-126)

Chain BMonoclonal antibody S2X259 Fab light chainview chain

2 domains

e7m7wB1(B:2-114)e7m7wB2(B:115-217)

Chain CMonoclonal antibody S2H97 Fab heavy chainview chain

2 domains

e7m7wC1(C:1-120)e7m7wC2(C:121-221)

Chain DMonoclonal antibody S2H97 Fab light chainview chain

2 domains

e7m7wD1(D:2-113)e7m7wD2(D:114-216)

Chain EMonoclonal antibody S2H97 Fab heavy chainview chain

2 domains

e7m7wE1(E:121-222)e7m7wE2(E:1-120)

Chain FMonoclonal antibody S2H97 Fab light chainview chain

2 domains

e7m7wF1(F:114-216)e7m7wF2(F:2-113)

Chain HMonoclonal antibody S2X259 Fab heavy chainview chain

2 domains

e7m7wH1(H:127-228)e7m7wH2(H:3-126)

Chain LMonoclonal antibody S2X259 Fab light chainview chain

2 domains

e7m7wL1(L:115-217)e7m7wL2(L:2-114)

Chain RSpike protein S1view chain

1 domain

e7m7wR1(R:332-529)

Chain SSpike protein S1view chain

1 domain

e7m7wS1(S:332-528)

All Domains (18)

#	Chain	Domain ID	Range	Family	Classification
1	A	e7m7wA1	A:127-228	C1-set	11 → 11.1 → 11.1.1
2	A	e7m7wA2	A:2-126	V-set	11 → 11.1 → 11.1.1
3	B	e7m7wB1	B:2-114	V-set	11 → 11.1 → 11.1.1
4	B	e7m7wB2	B:115-217	C1-set	11 → 11.1 → 11.1.1
5	C	e7m7wC1	C:1-120	V-set	11 → 11.1 → 11.1.1
6	C	e7m7wC2	C:121-221	C1-set	11 → 11.1 → 11.1.1
7	D	e7m7wD1	D:2-113	V-set	11 → 11.1 → 11.1.1
8	D	e7m7wD2	D:114-216	C1-set	11 → 11.1 → 11.1.1
9	E	e7m7wE1	E:121-222	C1-set	11 → 11.1 → 11.1.1
10	E	e7m7wE2	E:1-120	V-set	11 → 11.1 → 11.1.1
11	F	e7m7wF1	F:114-216	C1-set	11 → 11.1 → 11.1.1
12	F	e7m7wF2	F:2-113	V-set	11 → 11.1 → 11.1.1
13	H	e7m7wH1	H:127-228	C1-set	11 → 11.1 → 11.1.1
14	H	e7m7wH2	H:3-126	V-set	11 → 11.1 → 11.1.1
15	L	e7m7wL1	L:115-217	C1-set	11 → 11.1 → 11.1.1
16	L	e7m7wL2	L:2-114	V-set	11 → 11.1 → 11.1.1
17	R	e7m7wR1	R:332-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
18	S	e7m7wS1	S:332-528	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors