ECODEvolutionary Classification of Protein Domains

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PDB 7MBM

ELECTRON MICROSCOPY14 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ARetinoblastoma-binding protein 5view chain

1 domain

e7mbmA1(A:11-326)

Chain BWD repeat-containing protein 5view chain

1 domain

e7mbmB1(B:33-332)

Chain CHistone-lysine N-methyltransferase 2Aview chain

1 domain

e7mbmC1(C:3790-3969)

Chain DSet1/Ash2 histone methyltransferase complex subunit ASH2view chain

1 domain

e7mbmD1(D:287-400,D:445-504)

Chain GHistone H3view chain

1 domain

e7mbmG1(G:38-134)

Chain HHistone H4view chain

1 domain

e7mbmH1(H:22-101)

Chain IHistone H2Aview chain

1 domain

e7mbmI1(I:11-117)

Chain JHistone H2B 1.1view chain

1 domain

e7mbmJ1(J:27-120)

Chain KHistone H3view chain

1 domain

e7mbmK1(K:38-134)

Chain LHistone H4view chain

1 domain

e7mbmL1(L:24-101)

Chain MHistone H2Aview chain

1 domain

e7mbmM1(M:13-117)

Chain NHistone H2B 1.1view chain

1 domain

e7mbmN1(N:28-122)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e7mbmA1	A:11-326	WD40	5 → 5.1 → 5.1.4
2	B	e7mbmB1	B:33-332	WD40, eIF2A, Beta-prop_WDR5	5 → 5.1 → 5.1.5
3	C	e7mbmC1	C:3790-3969	SET	70 → 70.3 → 70.3.1
4	D	e7mbmD1	D:287-400,D:445-504	SPRY	10 → 10.1 → 10.1.1
5	G	e7mbmG1	G:38-134	Histone	148 → 148.1 → 148.1.1
6	H	e7mbmH1	H:22-101	CENP-T_C	148 → 148.1 → 148.1.1
7	I	e7mbmI1	I:11-117	Histone,Histone_H2A_C	148 → 148.1 → 148.1.1
8	J	e7mbmJ1	J:27-120	Histone	148 → 148.1 → 148.1.1
9	K	e7mbmK1	K:38-134	Histone	148 → 148.1 → 148.1.1
10	L	e7mbmL1	L:24-101	CENP-T_C	148 → 148.1 → 148.1.1
11	M	e7mbmM1	M:13-117	Histone,Histone_H2A_C	148 → 148.1 → 148.1.1
12	N	e7mbmN1	N:28-122	Histone	148 → 148.1 → 148.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors