ECODEvolutionary Classification of Protein Domains

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PDB 7NHO

ELECTRON MICROSCOPY15 chains16 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain APhotosystem II protein D1 1view chain

1 domain

e7nhoA1(A:10-344)

Chain BPhotosystem II CP47 reaction center proteinview chain

2 domains

e7nhoB1(B:2-328,B:445-486)e7nhoB2(B:329-444)

Chain CPhotosystem II CP43 reaction center proteinview chain

1 domain

e7nhoC1(C:14-461)

Chain DPhotosystem II D2 proteinview chain

1 domain

e7nhoD1(D:13-352)

Chain ECytochrome b559 subunit alphaview chain

1 domain

e7nhoE1(E:8-84)

Chain FCytochrome b559 subunit betaview chain

1 domain

e7nhoF1(F:8-45)

Chain HPhotosystem II reaction center protein Hview chain

1 domain

e7nhoH1(H:2-66)

Chain IPhotosystem II reaction center protein Iview chain

1 domain

e7nhoI1(I:1-35)

Chain KPhotosystem II reaction center protein Kview chain

1 domain

e7nhoK1(K:10-46)

Chain LPhotosystem II reaction center protein Lview chain

1 domain

e7nhoL1(L:1-37)

Chain MPhotosystem II reaction center protein Mview chain

1 domain

e7nhoM1(M:1-34)

Chain TPhotosystem II reaction center protein Tview chain

1 domain

e7nhoT1(T:1-30)

Chain XPhotosystem II reaction center X proteinview chain

1 domain

e7nhoX1(X:2-36)

Chain yPhotosystem II reaction center protein Ycf12view chain

1 domain

e7nhoy1(y:19-46)

Chain ZPhotosystem II reaction center protein Zview chain

1 domain

e7nhoZ1(Z:1-62)

All Domains (16)

#	Chain	Domain ID	Range	Family	Classification
1	A	e7nhoA1	A:10-344	Photo_RC	5037 → 5037.1 → 5037.1.1
2	B	e7nhoB1	B:2-328,B:445-486	PSII	5075 → 5075.1 → 5075.1.1
3	B	e7nhoB2	B:329-444	PSII	3744 → 3744.1 → 3744.1.1
4	C	e7nhoC1	C:14-461	PSII	5075 → 5075.1 → 5075.1.1
5	D	e7nhoD1	D:13-352	Photo_RC	5037 → 5037.1 → 5037.1.1
6	E	e7nhoE1	E:8-84	Cytochrom_B559,Cytochrom_B559a	5036 → 5036.1 → 5036.1.1
7	F	e7nhoF1	F:8-45	Cytochrom_B559	5036 → 5036.1 → 5036.1.1
8	H	e7nhoH1	H:2-66	PsbH	5032 → 5032.1 → 5032.1.1
9	I	e7nhoI1	I:1-35	PsbI	5035 → 5035.1 → 5035.1.1
10	K	e7nhoK1	K:10-46	PsbK	5034 → 5034.1 → 5034.1.1
11	L	e7nhoL1	L:1-37	PsbL	5030 → 5030.1 → 5030.1.1
12	M	e7nhoM1	M:1-34	PsbM	5033 → 5033.1 → 5033.1.1
13	T	e7nhoT1	T:1-30	PsbT	3390 → 3390.1 → 3390.1.1
14	X	e7nhoX1	X:2-36	PsbX	3493 → 3493.1 → 3493.1.1
15	y	e7nhoy1	y:19-46	PSII_Ycf12	3379 → 3379.1 → 3379.1.1
16	Z	e7nhoZ1	Z:1-62	Ycf9	5044 → 5044.1 → 5044.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors